RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 NBPF11Q86T75 865 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 MICU3Q86XE3 530 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 CCDC144CPQ8IYA2 1237 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 MROH8Q9H579 483 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 GJD2Q9UKL4 321 aa17.59■□□□□ 0.41
CD9-210ENST00000543916 ZNFX1Q9P2E3 1918 aaKnown RBP17.59■□□□□ 0.41
CD9-210ENST00000543916 HTTP42858 3142 aa17.58■□□□□ 0.41
CD9-210ENST00000543916 CALM1P0DP23 149 aa17.58■□□□□ 0.4
CD9-210ENST00000543916 CALM2P0DP24 149 aa17.58■□□□□ 0.4
CD9-210ENST00000543916 CALM3P0DP25 149 aa17.58■□□□□ 0.4
CD9-210ENST00000543916 HOXD10P28358 340 aa17.58■□□□□ 0.4
CD9-210ENST00000543916 PKN2Q16513 984 aaKnown RBP17.58■□□□□ 0.4
CD9-210ENST00000543916 FBXO46Q6PJ61 603 aaPredicted RBP17.58■□□□□ 0.4
CD9-210ENST00000543916 CTCFLQ8NI51 663 aaPredicted RBP17.58■□□□□ 0.4
CD9-210ENST00000543916 JMJD4Q9H9V9 463 aa17.58■□□□□ 0.4
CD9-210ENST00000543916 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.4
CD9-210ENST00000543916 PTCH2Q9Y6C5 1203 aa17.58■□□□□ 0.4
CD9-210ENST00000543916 PLXNA1Q9UIW2 1896 aa17.58■□□□□ 0.4
CD9-210ENST00000543916 ZBTB43O43298 467 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 CYTH3O43739 400 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 PLEKHA8P1O95397 391 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 ICAM1P05362 532 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 PTPREP23469 700 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 FLT3LGP49771 235 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 PRMT2P55345 433 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 CDC37Q16543 378 aaPredicted RBP17.57■□□□□ 0.4
CD9-210ENST00000543916 MORN1Q5T089 497 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 USP6NLQ92738 828 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 C22orf23Q9BZE7 217 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 VAT1LQ9HCJ6 419 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
CD9-210ENST00000543916 SLC15A5A6NIM6 579 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 DHX16O60231 1041 aaKnown RBP17.56■□□□□ 0.4
CD9-210ENST00000543916 KIF5BP33176 963 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 COPB2P35606 906 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 RBM25P49756 843 aaKnown RBP17.56■□□□□ 0.4
CD9-210ENST00000543916 GRB14Q14449 540 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 FANCBQ8NB91 859 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 MTMR8Q96EF0 704 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 KIF2CQ99661 725 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 RIOX1Q9H6W3 641 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 HOMER2Q9NSB8 354 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 CCPG1Q9ULG6 757 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 IVNS1ABPQ9Y6Y0 642 aa17.56■□□□□ 0.4
CD9-210ENST00000543916 NID2Q14112 1375 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 LCTP09848 1927 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 ALAS1P13196 640 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 QRICH1Q2TAL8 776 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 CMTR1Q8N1G2 835 aaKnown RBP17.55■□□□□ 0.4
CD9-210ENST00000543916 SRBD1Q8N5C6 995 aaKnown RBP17.55■□□□□ 0.4
CD9-210ENST00000543916 SOCS4Q8WXH5 440 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 LARP6Q9BRS8 491 aaKnown RBP17.55■□□□□ 0.4
CD9-210ENST00000543916 RNF146Q9NTX7 359 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 NAP1L2Q9ULW6 460 aaPredicted RBP17.55■□□□□ 0.4
CD9-210ENST00000543916 HPS5Q9UPZ3 1129 aa17.55■□□□□ 0.4
CD9-210ENST00000543916 GOLGA8AA7E2F4 631 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 STRNO43815 780 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 FCER1AP12319 257 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 ADORA2AP29274 412 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 RCAN1P53805 252 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 EVCP57679 992 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 MAP2K5Q13163 448 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 IRF5Q13568 498 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 TKFCQ3LXA3 575 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 MUM1L1Q5H9M0 696 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.54■□□□□ 0.4
CD9-210ENST00000543916 ABRAQ8N0Z2 381 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 CHST13Q8NET6 341 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 RAET1EQ8TD07 263 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 PIGSQ96S52 555 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 MMP19Q99542 508 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 SPZ1Q9BXG8 430 aa17.54■□□□□ 0.4
CD9-210ENST00000543916 FAM217BQ9NTX9 383 aaPredicted RBP17.54■□□□□ 0.4
CD9-210ENST00000543916 PPP1R11O60927 126 aaPredicted RBP17.53■□□□□ 0.4
CD9-210ENST00000543916 CYP2B6P20813 491 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 CDC27P30260 824 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 GNAQP50148 359 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 METAP2P50579 478 aaKnown RBP eCLIP17.53■□□□□ 0.4
CD9-210ENST00000543916 RTN1Q16799 776 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 USH1GQ495M9 461 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 HOMER1Q86YM7 354 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 TNS4Q8IZW8 715 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 ALDH8A1Q9H2A2 487 aaPredicted RBP17.53■□□□□ 0.4
CD9-210ENST00000543916 ACAD9Q9H845 621 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 UPF2Q9HAU5 1272 aaKnown RBP17.53■□□□□ 0.4
CD9-210ENST00000543916 RBM28Q9NW13 759 aaKnown RBP17.53■□□□□ 0.4
CD9-210ENST00000543916 FBXO40Q9UH90 709 aa17.53■□□□□ 0.4
CD9-210ENST00000543916 BAZ2BQ9UIF8 2168 aaKnown RBP17.53■□□□□ 0.4
CD9-210ENST00000543916 CNTNAP5Q8WYK1 1306 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 ZBTB5O15062 677 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 ADCY3O60266 1144 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 COBLO75128 1261 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms