RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 STAT6P42226 847 aa19.33■□□□□ 0.69
PTPRO-209ENST00000543886 FMR1Q06787 632 aaKnown RBP eCLIP19.33■□□□□ 0.69
PTPRO-209ENST00000543886 DHX8Q14562 1220 aaKnown RBP19.33■□□□□ 0.69
PTPRO-209ENST00000543886 ARID5BQ14865 1188 aa19.33■□□□□ 0.69
PTPRO-209ENST00000543886 TTLL6Q8N841 843 aa19.33■□□□□ 0.69
PTPRO-209ENST00000543886 PNMA6FA0A0J9YX94 578 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 FAM196BA6NMK8 535 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 SLURP2P0DP57 97 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 CASP1P29466 404 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 BAG6P46379 1132 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 CFAP100Q494V2 611 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 CCDC93Q567U6 631 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 PPP1R18Q6NYC8 613 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 ADGRF4Q8IZF3 695 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 JMJD4Q9H9V9 463 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 BIN2Q9UBW5 565 aaPredicted RBP19.32■□□□□ 0.68
PTPRO-209ENST00000543886 NFE2L3Q9Y4A8 694 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 YDJCA8MPS7 323 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 GTPBP6O43824 516 aaPredicted RBP19.32■□□□□ 0.68
PTPRO-209ENST00000543886 OR52Z1P0C646 297 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 JAKMIP3Q5VZ66 844 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 SH3BP5LQ7L8J4 393 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 TRMT44Q8IYL2 757 aaKnown RBP19.32■□□□□ 0.68
PTPRO-209ENST00000543886 RTKN2Q8IZC4 609 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 CCDC150Q8NCX0 1101 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 COA7Q96BR5 231 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 TDRD3Q9H7E2 651 aaKnown RBP19.32■□□□□ 0.68
PTPRO-209ENST00000543886 KANSL2Q9H9L4 492 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 DISC1Q9NRI5 854 aa19.32■□□□□ 0.68
PTPRO-209ENST00000543886 SKILP12757 684 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 UBA7P41226 1012 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 ORC2Q13416 577 aaPredicted RBP19.31■□□□□ 0.68
PTPRO-209ENST00000543886 KARSQ15046 597 aaKnown RBP19.31■□□□□ 0.68
PTPRO-209ENST00000543886 TBCKQ8TEA7 893 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 STAMQ92783 540 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 PDGFDQ9GZP0 370 aaPredicted RBP19.31■□□□□ 0.68
PTPRO-209ENST00000543886 PSME4Q14997 1843 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 RAD21O60216 631 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 ENTPD3O75355 529 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 CDC25AP30304 524 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 TTBK2Q6IQ55 1244 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 KCTD1Q719H9 257 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 TMEM260Q9NX78 707 aa19.31■□□□□ 0.68
PTPRO-209ENST00000543886 EEF2P13639 858 aaKnown RBP19.3■□□□□ 0.68
PTPRO-209ENST00000543886 CDK11BP21127 795 aaKnown RBP19.3■□□□□ 0.68
PTPRO-209ENST00000543886 RRAGBQ5VZM2 374 aa19.3■□□□□ 0.68
PTPRO-209ENST00000543886 TATDN1Q6P1N9 297 aa19.3■□□□□ 0.68
PTPRO-209ENST00000543886 AK8Q96MA6 479 aa19.3■□□□□ 0.68
PTPRO-209ENST00000543886 BLZF1Q9H2G9 400 aa19.3■□□□□ 0.68
PTPRO-209ENST00000543886 NYAP2Q9P242 653 aa19.3■□□□□ 0.68
PTPRO-209ENST00000543886 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
PTPRO-209ENST00000543886 SLC16A2P36021 539 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 TMEM179Q6ZVK1 233 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 DCAF4Q8WV16 495 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 DPF2Q92785 391 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 MKL1Q969V6 931 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 CCSER1Q9C0I3 900 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 RMND1Q9NWS8 449 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 ATRNL1Q5VV63 1379 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 PP2D1A8MPX8 630 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 ZBTB5O15062 677 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTPRO-209ENST00000543886 CCZ1BP86790 482 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 CCZ1P86791 482 aaPredicted RBP19.29■□□□□ 0.68
PTPRO-209ENST00000543886 KLHL10Q6JEL2 608 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 RIC8AQ9NPQ8 531 aa19.29■□□□□ 0.68
PTPRO-209ENST00000543886 COL2A1P02458 1487 aaPredicted RBP19.29■□□□□ 0.68
PTPRO-209ENST00000543886 GOLGB1Q14789 3259 aaKnown RBP19.28■□□□□ 0.68
PTPRO-209ENST00000543886 USP17L10C9JJH3 530 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 NRDCO43847 1150 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 ZNF18P17022 549 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 SLC1A4P43007 532 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 ICA1Q05084 483 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 CUL4BQ13620 913 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 ABCB5Q2M3G0 1257 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 HSP90AA4PQ58FG1 418 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 PRMT6Q96LA8 375 aaPredicted RBP19.28■□□□□ 0.68
PTPRO-209ENST00000543886 PSMD1Q99460 953 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 PDCL3Q9H2J4 239 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 SEPT2Q15019 361 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 SPATA1Q5VX52 437 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 SLFN13Q68D06 897 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
PTPRO-209ENST00000543886 LARGE2Q8N3Y3 721 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 CUL5Q93034 780 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 MTRQ99707 1265 aa19.28■□□□□ 0.68
PTPRO-209ENST00000543886 PPP1R11O60927 126 aaPredicted RBP19.27■□□□□ 0.68
PTPRO-209ENST00000543886 RPN1P04843 607 aaKnown RBP19.27■□□□□ 0.68
PTPRO-209ENST00000543886 CD44P16070 742 aaKnown RBP19.27■□□□□ 0.68
PTPRO-209ENST00000543886 SHROOM1Q2M3G4 852 aaPredicted RBP19.27■□□□□ 0.68
PTPRO-209ENST00000543886 DEFB132Q7Z7B7 95 aa19.27■□□□□ 0.68
PTPRO-209ENST00000543886 VSTM4Q8IW00 320 aa19.27■□□□□ 0.68
PTPRO-209ENST00000543886 SMYD4Q8IYR2 804 aaPredicted RBP19.27■□□□□ 0.68
PTPRO-209ENST00000543886 MTMR8Q96EF0 704 aa19.27■□□□□ 0.68
PTPRO-209ENST00000543886 HDAC9Q9UKV0 1011 aa19.27■□□□□ 0.68
PTPRO-209ENST00000543886 GDF11O95390 407 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 DPEP1P16444 411 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 ARMCX5Q6P1M9 558 aa19.26■□□□□ 0.67
PTPRO-209ENST00000543886 CABP7Q86V35 215 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms