RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 Q7L0L9 218 aa19.28■□□□□ 0.68
SPPL3-207ENST00000543608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.28■□□□□ 0.68
SPPL3-207ENST00000543608 FAM160B2Q86V87 743 aa19.28■□□□□ 0.68
SPPL3-207ENST00000543608 CHST13Q8NET6 341 aa19.28■□□□□ 0.68
SPPL3-207ENST00000543608 STAG1Q8WVM7 1258 aa19.28■□□□□ 0.68
SPPL3-207ENST00000543608 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
SPPL3-207ENST00000543608 PRKAG2Q9UGJ0 569 aa19.28■□□□□ 0.68
SPPL3-207ENST00000543608 FBXO40Q9UH90 709 aa19.28■□□□□ 0.68
SPPL3-207ENST00000543608 CCDC171Q6TFL3 1326 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 LCTP09848 1927 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 ADCY6O43306 1168 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 IRX5P78411 483 aaPredicted RBP19.27■□□□□ 0.68
SPPL3-207ENST00000543608 CNTN2Q02246 1040 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 CCDC96Q2M329 555 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 MAMDC4Q6UXC1 1216 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 SH3RF1Q7Z6J0 888 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 RNF180Q86T96 592 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 CHD1LQ86WJ1 897 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 MSL3Q8N5Y2 521 aaKnown RBP19.27■□□□□ 0.68
SPPL3-207ENST00000543608 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.68
SPPL3-207ENST00000543608 ACAD9Q9H845 621 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 PDLIM7Q9NR12 457 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.27■□□□□ 0.68
SPPL3-207ENST00000543608 LAMA4Q16363 1823 aa19.27■□□□□ 0.68
SPPL3-207ENST00000543608 A0A1W2PQ45 241 aaPredicted RBP19.26■□□□□ 0.67
SPPL3-207ENST00000543608 A0A1W2PQY0 241 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 MYADML2A6NDP7 307 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 FGRP09769 529 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 ALAS1P13196 640 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 PPP4R3BQ5MIZ7 849 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 ZNF467Q7Z7K2 595 aaPredicted RBP19.26■□□□□ 0.67
SPPL3-207ENST00000543608 PLEKHM2Q8IWE5 1019 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 CHURC1Q8WUH1 139 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 A1CFQ9NQ94 594 aaKnown RBP19.26■□□□□ 0.67
SPPL3-207ENST00000543608 PRR12Q9ULL5 1215 aa19.26■□□□□ 0.67
SPPL3-207ENST00000543608 DDX49Q9Y6V7 483 aaKnown RBP19.26■□□□□ 0.67
SPPL3-207ENST00000543608 TLE2Q04725 743 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 AAMPQ13685 434 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 ACVR2BQ13705 512 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 RCSD1Q6JBY9 416 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 ARMCX2Q7L311 632 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 TBC1D10CQ8IV04 446 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 CCDC144CPQ8IYA2 1237 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 FAM184BQ9ULE4 1060 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
SPPL3-207ENST00000543608 FRMPD2Q68DX3 1309 aaPredicted RBP19.25■□□□□ 0.67
SPPL3-207ENST00000543608 TRIM43BA6NCK2 446 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 POTEB2H3BUK9 544 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 FDX1P10109 184 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 NOVP48745 357 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 NUCB1Q02818 461 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 MUM1L1Q5H9M0 696 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 C1orf53Q5VUE5 145 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 TTBK2Q6IQ55 1244 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 FAM133AQ8N9E0 248 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 BADQ92934 168 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 TRIM43Q96BQ3 446 aaPredicted RBP19.24■□□□□ 0.67
SPPL3-207ENST00000543608 TRERF1Q96PN7 1200 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 TMEM47Q9BQJ4 181 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 ASTN1O14525 1302 aa19.24■□□□□ 0.67
SPPL3-207ENST00000543608 SOWAHBA6NEL2 793 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 PLA2G6O60733 806 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 PQBP1O60828 265 aaKnown RBP19.23■□□□□ 0.67
SPPL3-207ENST00000543608 SDSP20132 328 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 SLC16A2P36021 539 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 ACLYP53396 1101 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 CCDC144BQ3MJ40 725 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 DEFB123Q8N688 67 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 DCAF4Q8WV16 495 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 KATNBL1Q9H079 304 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 ABHD16BQ9H3Z7 469 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 NEDD4P46934 1319 aa19.23■□□□□ 0.67
SPPL3-207ENST00000543608 ITGB8P26012 769 aa19.22■□□□□ 0.67
SPPL3-207ENST00000543608 KLHDC9Q8NEP7 349 aa19.22■□□□□ 0.67
SPPL3-207ENST00000543608 GPCPD1Q9NPB8 672 aa19.22■□□□□ 0.67
SPPL3-207ENST00000543608 CCPG1Q9ULG6 757 aa19.22■□□□□ 0.67
SPPL3-207ENST00000543608 COL6A3P12111 3177 aa19.22■□□□□ 0.67
SPPL3-207ENST00000543608 LAMA2P24043 3122 aaKnown RBP19.22■□□□□ 0.67
SPPL3-207ENST00000543608 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.21■□□□□ 0.67
SPPL3-207ENST00000543608 DUSP11O75319 330 aaKnown RBP19.21■□□□□ 0.67
SPPL3-207ENST00000543608 CLTBP09497 229 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 C6orf222P0C671 652 aaPredicted RBP19.21■□□□□ 0.67
SPPL3-207ENST00000543608 TOP1P11387 765 aaKnown RBP19.21■□□□□ 0.67
SPPL3-207ENST00000543608 PTGS1P23219 599 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 KCNA10Q16322 511 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 C9orf50Q5SZB4 431 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 CCSAPQ6IQ19 270 aaPredicted RBP19.21■□□□□ 0.67
SPPL3-207ENST00000543608 GPR153Q6NV75 609 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 CWC27Q6UX04 472 aaKnown RBP19.21■□□□□ 0.67
SPPL3-207ENST00000543608 PURBQ96QR8 312 aaKnown RBP19.21■□□□□ 0.67
SPPL3-207ENST00000543608 OSBPL3Q9H4L5 887 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 STARD7Q9NQZ5 370 aa19.21■□□□□ 0.67
SPPL3-207ENST00000543608 ICAM1P05362 532 aa19.2■□□□□ 0.66
SPPL3-207ENST00000543608 SHHQ15465 462 aa19.2■□□□□ 0.66
SPPL3-207ENST00000543608 TKFCQ3LXA3 575 aa19.2■□□□□ 0.66
SPPL3-207ENST00000543608 SYDE2Q5VT97 1194 aa19.2■□□□□ 0.66
SPPL3-207ENST00000543608 NSMFQ6X4W1 530 aa19.2■□□□□ 0.66
SPPL3-207ENST00000543608 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
SPPL3-207ENST00000543608 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms