RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TOX2Q96NM4 488 aa20.67■□□□□ 0.9
PPP1CA-210ENST00000542876 PCDHB15Q9Y5E8 787 aa20.67■□□□□ 0.9
PPP1CA-210ENST00000542876 TSPY2A6NKD2 308 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 C6orf222P0C671 652 aaPredicted RBP20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 ARMCX2Q7L311 632 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 ANKRD33Q7Z3H0 272 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 OTUD7AQ8TE49 926 aaPredicted RBP20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 VTI1AQ96AJ9 217 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 GMCL1Q96IK5 515 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 RNPC3Q96LT9 517 aaKnown RBP20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 ACAD9Q9H845 621 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 STX8Q9UNK0 236 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 LTBP2Q14767 1821 aa20.66■□□□□ 0.9
PPP1CA-210ENST00000542876 SMCHD1A6NHR9 2005 aa20.65■□□□□ 0.9
PPP1CA-210ENST00000542876 MROH7Q68CQ1 1323 aa20.65■□□□□ 0.9
PPP1CA-210ENST00000542876 FPGSQ05932 587 aa20.65■□□□□ 0.9
PPP1CA-210ENST00000542876 CCDC144BQ3MJ40 725 aa20.65■□□□□ 0.9
PPP1CA-210ENST00000542876 STAG1Q8WVM7 1258 aa20.65■□□□□ 0.9
PPP1CA-210ENST00000542876 PLXNA1Q9UIW2 1896 aa20.64■□□□□ 0.9
PPP1CA-210ENST00000542876 LAMA2P24043 3122 aaKnown RBP20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 ELP1O95163 1332 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 MCCP23508 829 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 ITGB8P26012 769 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 CST5P28325 142 aaPredicted RBP20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 FAAP100Q0VG06 881 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 TKFCQ3LXA3 575 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 CCDC144CPQ8IYA2 1237 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 SEMA6BQ9H3T3 888 aa20.64■□□□□ 0.89
PPP1CA-210ENST00000542876 GNASQ5JWF2 1037 aa20.63■□□□□ 0.89
PPP1CA-210ENST00000542876 CCSAPQ6IQ19 270 aaPredicted RBP20.63■□□□□ 0.89
PPP1CA-210ENST00000542876 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
PPP1CA-210ENST00000542876 RNF146Q9NTX7 359 aa20.63■□□□□ 0.89
PPP1CA-210ENST00000542876 CUL9Q8IWT3 2517 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 MYADML2A6NDP7 307 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 ASB14A6NK59 587 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 PLA2G6O60733 806 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 ASGR1P07306 291 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 GJA9P57773 515 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 CTDSPL2Q05D32 466 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 ANKRD45Q5TZF3 282 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 CCDC129Q6ZRS4 1044 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 KCTD1Q719H9 257 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 FGD4Q96M96 766 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 AGBL1Q96MI9 1066 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 TRERF1Q96PN7 1200 aa20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 CDX2Q99626 313 aaPredicted RBP20.62■□□□□ 0.89
PPP1CA-210ENST00000542876 A0A0U1RQG5 324 aaPredicted RBP20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 RANBP6O60518 1105 aaKnown RBP20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 TIMP1P01033 207 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 ALAS1P13196 640 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 CNTN2Q02246 1040 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 RCSD1Q6JBY9 416 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 CCDC174Q6PII3 467 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 FAM133AQ8N9E0 248 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 EVI5LQ96CN4 794 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 UPF3AQ9H1J1 476 aaKnown RBP20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 A1CFQ9NQ94 594 aaKnown RBP20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 MYH4Q9Y623 1939 aa20.61■□□□□ 0.89
PPP1CA-210ENST00000542876 EPHB4P54760 987 aa20.6■□□□□ 0.89
PPP1CA-210ENST00000542876 TNFAIP2Q03169 654 aa20.6■□□□□ 0.89
PPP1CA-210ENST00000542876 TOMM22Q9NS69 142 aa20.6■□□□□ 0.89
PPP1CA-210ENST00000542876 MTMR7Q9Y216 660 aa20.6■□□□□ 0.89
PPP1CA-210ENST00000542876 ZNF536O15090 1300 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 TMEM265A0A087WTH1 108 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 ARVCFO00192 962 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 TLR3O15455 904 aaKnown RBP20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 ADCY6O43306 1168 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 CCDC96Q2M329 555 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 IL17RBQ9NRM6 502 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 HELLSQ9NRZ9 838 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 ANAPC4Q9UJX5 808 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 TBX21Q9UL17 535 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
PPP1CA-210ENST00000542876 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 NMT2O60551 498 aa20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 CDK7P50613 346 aa20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 IRX5P78411 483 aaPredicted RBP20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 PPIGQ13427 754 aaKnown RBP eCLIP20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 MFSD5Q6N075 450 aa20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 MAFAQ8NHW3 353 aaPredicted RBP20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 KATNBL1Q9H079 304 aa20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 AP5M1Q9H0R1 490 aa20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 TTYH1Q9H313 450 aaPredicted RBP20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 INCENPQ9NQS7 918 aa20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 CCPG1Q9ULG6 757 aa20.58■□□□□ 0.89
PPP1CA-210ENST00000542876 SOWAHBA6NEL2 793 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 FOXP2O15409 715 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 ZEB2O60315 1214 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 SNAP25P60880 206 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 TMEM199Q8N511 208 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 DCAF4Q8WV16 495 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 MYLIPQ8WY64 445 aa20.57■□□□□ 0.88
PPP1CA-210ENST00000542876 SALL3Q9BXA9 1300 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms