RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 CYB5R4Q7L1T6 521 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 RALYLQ86SE5 291 aaKnown RBP7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 ANKLE1Q8NAG6 615 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 NCOA7Q8NI08 942 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 CHMP4CQ96CF2 233 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 ACAD9Q9H845 621 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 KAT14Q9H8E8 782 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 GPCPD1Q9NPB8 672 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 PPP4R2Q9NY27 417 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 OGDHLQ9ULD0 1010 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 TAF6LQ9Y6J9 622 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 LCTP09848 1927 aa7.35□□□□□ -1.23
LRTOMT-220ENST00000542846 SMCHD1A6NHR9 2005 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 MSCO60682 206 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 FARP2O94887 1054 aaPredicted RBP7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 TFRCP02786 760 aaKnown RBP7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 ICAM1P05362 532 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 PGK2P07205 417 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 CYBAP13498 195 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 SLC16A2P36021 539 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 SLC4A3P48751 1232 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 NECTIN1Q15223 517 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 ASPRV1Q53RT3 343 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 IFIT1BQ5T764 474 aaKnown RBP7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 LHX8Q68G74 356 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 CCDC174Q6PII3 467 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 ZNF467Q7Z7K2 595 aaPredicted RBP7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 MB21D2Q8IYB1 491 aaPredicted RBP7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 ANKRD35Q8N283 1001 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 MSL3Q8N5Y2 521 aaKnown RBP7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 TRPV1Q8NER1 839 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 DDX11Q96FC9 970 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 AGBL1Q96MI9 1066 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 TINF2Q9BSI4 451 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 ANO2Q9NQ90 1003 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 RNF146Q9NTX7 359 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 NRBP1Q9UHY1 535 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 PNMA2Q9UL42 364 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 CCPG1Q9ULG6 757 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 LRRC37A2A6NM11 1700 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 MYH6P13533 1939 aa7.34□□□□□ -1.23
LRTOMT-220ENST00000542846 MCM3APO60318 1980 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 PFASO15067 1338 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 WDR19Q8NEZ3 1342 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 SYNGAP1Q96PV0 1343 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 ALPK3Q96L96 1907 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 ERICH2A1L162 156 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 IFIT3O14879 490 aaKnown RBP7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 SLC27A2O14975 620 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 SEPT4O43236 478 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 PARP1P09874 1014 aaKnown RBP7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 GOLGA8HP0CJ92 632 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 ALAS1P13196 640 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 ANTXR2P58335 489 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 SNAP25P60880 206 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 SART3Q15020 963 aaKnown RBP7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 PRPF38BQ5VTL8 546 aaKnown RBP7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 RNF20Q5VTR2 975 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 CREB3L3Q68CJ9 461 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 FAM133AQ8N9E0 248 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 FGD4Q96M96 766 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 TRERF1Q96PN7 1200 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 MTA3Q9BTC8 594 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 A1CFQ9NQ94 594 aaKnown RBP7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 HOMER2Q9NSB8 354 aa7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
LRTOMT-220ENST00000542846 POTEB2H3BUK9 544 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 CNGA1P29973 690 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 MCM5P33992 734 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 MNX1P50219 401 aaPredicted RBP7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 WTAPQ15007 396 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 MUM1L1Q5H9M0 696 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 TMEM67Q5HYA8 995 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 NECAB2Q7Z6G3 386 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 PAWRQ96IZ0 340 aaKnown RBP7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 TMEM87BQ96K49 555 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 HTATIP2Q9BUP3 242 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 UBA5Q9GZZ9 404 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 CPVLQ9H3G5 476 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 CYP39A1Q9NYL5 469 aa7.32□□□□□ -1.24
LRTOMT-220ENST00000542846 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 PRC1O43663 620 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 SNAI1O95863 264 aaPredicted RBP7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 ZNF865P0CJ78 1059 aaPredicted RBP7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 COL6A1P12109 1028 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 TAL1P17542 331 aaPredicted RBP7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 TROAPQ12815 778 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 GRM4Q14833 912 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 CDC37Q16543 378 aaPredicted RBP7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 TSGA10IPQ3SY00 556 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 PRAMEF19Q5SWL8 479 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 CHST3Q7LGC8 479 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 ADGRF4Q8IZF3 695 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 STAG2Q8N3U4 1231 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 IGDCC4Q8TDY8 1250 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 DIS3LQ8TF46 1054 aaKnown RBP7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 CLEC4DQ8WXI8 215 aa7.31□□□□□ -1.24
LRTOMT-220ENST00000542846 MAP3K14Q99558 947 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms