RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 IFIT1BQ5T764 474 aaKnown RBP23.53■■□□□ 1.36
CACNA2D4-215ENST00000542340 MAML3Q96JK9 1138 aa23.53■■□□□ 1.36
CACNA2D4-215ENST00000542340 AGBL1Q96MI9 1066 aa23.53■■□□□ 1.36
CACNA2D4-215ENST00000542340 RANBP17Q9H2T7 1088 aaKnown RBP23.53■■□□□ 1.36
CACNA2D4-215ENST00000542340 SLC27A2O14975 620 aa23.52■■□□□ 1.36
CACNA2D4-215ENST00000542340 TNRC18O15417 2968 aaPredicted RBP23.52■■□□□ 1.36
CACNA2D4-215ENST00000542340 TFRCP02786 760 aaKnown RBP23.52■■□□□ 1.36
CACNA2D4-215ENST00000542340 PGK2P07205 417 aa23.52■■□□□ 1.36
CACNA2D4-215ENST00000542340 CYP2C19P33261 490 aa23.52■■□□□ 1.36
CACNA2D4-215ENST00000542340 CCDC174Q6PII3 467 aa23.52■■□□□ 1.36
CACNA2D4-215ENST00000542340 DDX11Q96FC9 970 aa23.52■■□□□ 1.36
CACNA2D4-215ENST00000542340 SNAP25P60880 206 aa23.51■■□□□ 1.35
CACNA2D4-215ENST00000542340 CREB3L3Q68CJ9 461 aa23.51■■□□□ 1.35
CACNA2D4-215ENST00000542340 ACAD9Q9H845 621 aa23.51■■□□□ 1.35
CACNA2D4-215ENST00000542340 DNAJC25-GNG10A0A024R161 153 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 ERICH2A1L162 156 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 IFIT3O14879 490 aaKnown RBP23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 ICAM1P05362 532 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 GOLGA8HP0CJ92 632 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 CCND3P30281 292 aaPredicted RBP23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 SART3Q15020 963 aaKnown RBP23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 ASPRV1Q53RT3 343 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 MB21D2Q8IYB1 491 aaPredicted RBP23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 ANKRD35Q8N283 1001 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 HOMER2Q9NSB8 354 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 RNF146Q9NTX7 359 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 PNMA2Q9UL42 364 aa23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 ZNFX1Q9P2E3 1918 aaKnown RBP23.5■■□□□ 1.35
CACNA2D4-215ENST00000542340 ALAS1P13196 640 aa23.49■■□□□ 1.35
CACNA2D4-215ENST00000542340 RNF20Q5VTR2 975 aa23.49■■□□□ 1.35
CACNA2D4-215ENST00000542340 UBE2Q1Q7Z7E8 422 aa23.49■■□□□ 1.35
CACNA2D4-215ENST00000542340 TRERF1Q96PN7 1200 aa23.49■■□□□ 1.35
CACNA2D4-215ENST00000542340 CCPG1Q9ULG6 757 aa23.49■■□□□ 1.35
CACNA2D4-215ENST00000542340 PARP1P09874 1014 aaKnown RBP23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 CYBAP13498 195 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 LHX8Q68G74 356 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 CHST3Q7LGC8 479 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 ANKLE1Q8NAG6 615 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 TINF2Q9BSI4 451 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 MTA3Q9BTC8 594 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 UBA5Q9GZZ9 404 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 OGDHLQ9ULD0 1010 aa23.48■■□□□ 1.35
CACNA2D4-215ENST00000542340 MKI67P46013 3256 aaKnown RBP23.47■■□□□ 1.35
CACNA2D4-215ENST00000542340 ANTXR2P58335 489 aa23.47■■□□□ 1.35
CACNA2D4-215ENST00000542340 WTAPQ15007 396 aa23.47■■□□□ 1.35
CACNA2D4-215ENST00000542340 MSL3Q8N5Y2 521 aaKnown RBP23.47■■□□□ 1.35
CACNA2D4-215ENST00000542340 TRPV1Q8NER1 839 aa23.47■■□□□ 1.35
CACNA2D4-215ENST00000542340 IGDCC4Q8TDY8 1250 aa23.47■■□□□ 1.35
CACNA2D4-215ENST00000542340 NRBP1Q9UHY1 535 aa23.47■■□□□ 1.35
CACNA2D4-215ENST00000542340 MSCO60682 206 aa23.46■■□□□ 1.35
CACNA2D4-215ENST00000542340 FARP2O94887 1054 aaPredicted RBP23.46■■□□□ 1.35
CACNA2D4-215ENST00000542340 MCM5P33992 734 aa23.46■■□□□ 1.35
CACNA2D4-215ENST00000542340 TMEM67Q5HYA8 995 aa23.46■■□□□ 1.35
CACNA2D4-215ENST00000542340 ZNF467Q7Z7K2 595 aaPredicted RBP23.46■■□□□ 1.35
CACNA2D4-215ENST00000542340 A1CFQ9NQ94 594 aaKnown RBP23.46■■□□□ 1.35
CACNA2D4-215ENST00000542340 PFASO15067 1338 aa23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 WDR19Q8NEZ3 1342 aa23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 CNGA1P29973 690 aa23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 MUM1L1Q5H9M0 696 aa23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 MAMDC4Q6UXC1 1216 aa23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 CPVLQ9H3G5 476 aa23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 DDX20Q9UHI6 824 aaKnown RBP23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 PDE4DIPQ5VU43 2346 aa23.45■■□□□ 1.34
CACNA2D4-215ENST00000542340 SYNGAP1Q96PV0 1343 aa23.44■■□□□ 1.34
CACNA2D4-215ENST00000542340 PRC1O43663 620 aa23.44■■□□□ 1.34
CACNA2D4-215ENST00000542340 TSGA10IPQ3SY00 556 aa23.44■■□□□ 1.34
CACNA2D4-215ENST00000542340 ADGRF4Q8IZF3 695 aa23.44■■□□□ 1.34
CACNA2D4-215ENST00000542340 SENP2Q9HC62 589 aa23.44■■□□□ 1.34
CACNA2D4-215ENST00000542340 PALM3A6NDB9 673 aaPredicted RBP23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 POTEB2H3BUK9 544 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 SEPT4O43236 478 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 PRAMEF19Q5SWL8 479 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 CATIPQ7Z7H3 387 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 TMTC2Q8N394 836 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 FAM133AQ8N9E0 248 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 TMEM87BQ96K49 555 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 CYP39A1Q9NYL5 469 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 MAD2L2Q9UI95 211 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 PLXNA1Q9UIW2 1896 aa23.43■■□□□ 1.34
CACNA2D4-215ENST00000542340 KLRF2D3W0D1 207 aa23.42■■□□□ 1.34
CACNA2D4-215ENST00000542340 TROAPQ12815 778 aa23.42■■□□□ 1.34
CACNA2D4-215ENST00000542340 GRM4Q14833 912 aa23.42■■□□□ 1.34
CACNA2D4-215ENST00000542340 STAG2Q8N3U4 1231 aa23.42■■□□□ 1.34
CACNA2D4-215ENST00000542340 FGD4Q96M96 766 aa23.42■■□□□ 1.34
CACNA2D4-215ENST00000542340 LY9Q9HBG7 655 aa23.42■■□□□ 1.34
CACNA2D4-215ENST00000542340 CNPY2Q9Y2B0 182 aa23.42■■□□□ 1.34
CACNA2D4-215ENST00000542340 MNX1P50219 401 aaPredicted RBP23.41■■□□□ 1.34
CACNA2D4-215ENST00000542340 CNTN2Q02246 1040 aa23.41■■□□□ 1.34
CACNA2D4-215ENST00000542340 CDC37Q16543 378 aaPredicted RBP23.41■■□□□ 1.34
CACNA2D4-215ENST00000542340 NECAB2Q7Z6G3 386 aa23.41■■□□□ 1.34
CACNA2D4-215ENST00000542340 PAWRQ96IZ0 340 aaKnown RBP23.41■■□□□ 1.34
CACNA2D4-215ENST00000542340 JMJD4Q9H9V9 463 aa23.41■■□□□ 1.34
CACNA2D4-215ENST00000542340 DHX16O60231 1041 aaKnown RBP23.4■■□□□ 1.34
CACNA2D4-215ENST00000542340 REC8O95072 547 aa23.4■■□□□ 1.34
CACNA2D4-215ENST00000542340 SNAI1O95863 264 aaPredicted RBP23.4■■□□□ 1.34
CACNA2D4-215ENST00000542340 TAL1P17542 331 aaPredicted RBP23.4■■□□□ 1.34
CACNA2D4-215ENST00000542340 COL9A3Q14050 684 aaPredicted RBP23.4■■□□□ 1.34
CACNA2D4-215ENST00000542340 KRT32Q14532 448 aa23.4■■□□□ 1.34
CACNA2D4-215ENST00000542340 NSMFQ6X4W1 530 aa23.4■■□□□ 1.34
CACNA2D4-215ENST00000542340 RASEFQ8IZ41 740 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms