RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 TMPRSS15P98073 1019 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 PCBP1Q15365 356 aaKnown RBP eCLIP6.61□□□□□ -1.35
DDB1-219ENST00000541513 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 INAVAQ3KP66 663 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 C1orf122Q6ZSJ8 110 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 CHST15Q7LFX5 561 aaPredicted RBP6.61□□□□□ -1.35
DDB1-219ENST00000541513 MAATS1Q7Z4T9 603 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 FTSJ3Q8IY81 847 aaKnown RBP6.61□□□□□ -1.35
DDB1-219ENST00000541513 THEMISQ8N1K5 641 aaPredicted RBP6.61□□□□□ -1.35
DDB1-219ENST00000541513 NKAIN3Q8N8D7 197 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 COG1Q8WTW3 980 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 PPM1MQ96MI6 270 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 MYD88Q99836 296 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 ISCA1Q9BUE6 129 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 MTFR1LQ9H019 292 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 TRIM39Q9HCM9 518 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 ARHGEF4Q9NR80 690 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
DDB1-219ENST00000541513 ZBTB21Q9ULJ3 1066 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 FAM50BQ9Y247 325 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 ZFYVE9O95405 1425 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 TMEM2Q9UHN6 1383 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 A0A1B0GVC2 190 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 PHF20L1A8MW92 1017 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 J3KRW8 73 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 SNUPNO95149 360 aaKnown RBP6.6□□□□□ -1.35
DDB1-219ENST00000541513 ADH1BP00325 375 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 ASGR2P07307 311 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 PF4V1P10720 104 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 HSD3B1P14060 373 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 IREB2P48200 963 aaKnown RBP6.6□□□□□ -1.35
DDB1-219ENST00000541513 TM4SF4P48230 202 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 GRB10Q13322 594 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 LRRFIP1Q32MZ4 808 aaKnown RBP6.6□□□□□ -1.35
DDB1-219ENST00000541513 FAM209AQ5JX71 171 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 DIEXFQ68CQ4 756 aaKnown RBP6.6□□□□□ -1.35
DDB1-219ENST00000541513 VHLLQ6RSH7 139 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 SRLQ86TD4 932 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 SCUBE1Q8IWY4 988 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 NAXEQ8NCW5 288 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 USP7Q93009 1102 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 KIFC2Q96AC6 838 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 TCF12Q99081 682 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 PHAXQ9H814 394 aaKnown RBP6.6□□□□□ -1.35
DDB1-219ENST00000541513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.6□□□□□ -1.35
DDB1-219ENST00000541513 CRTAC1Q9NQ79 661 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 ANLNQ9NQW6 1124 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 TRMT13Q9NUP7 481 aaKnown RBP6.6□□□□□ -1.35
DDB1-219ENST00000541513 DDX20Q9UHI6 824 aaKnown RBP6.6□□□□□ -1.35
DDB1-219ENST00000541513 GJD2Q9UKL4 321 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 NEXMIFQ5QGS0 1516 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 MED14O60244 1454 aa6.6□□□□□ -1.35
DDB1-219ENST00000541513 RIMS2Q9UQ26 1411 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 IQGAP1P46940 1657 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 TRAV20A0A0B4J274 112 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 F5H423 210 aaPredicted RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 NEMP1O14524 444 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 DDX3YO15523 660 aaKnown RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 AGR2O95994 175 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 EGFRP00533 1210 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 VCAM1P19320 739 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 ITPKAP23677 461 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 DEKP35659 375 aaKnown RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 RECQLP46063 649 aaPredicted RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 NUCB1Q02818 461 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 ADCY1Q08828 1119 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 CLN3Q13286 438 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 ARHGAP29Q52LW3 1261 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 DUSP27Q5VZP5 1158 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 TREML4Q6UXN2 200 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 LDHAL6AQ6ZMR3 332 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 RSRC2Q7L4I2 434 aaKnown RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 CCNJLQ8IV13 435 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 KIAA1958Q8N8K9 716 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 SPATA5Q8NB90 893 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 POF1BQ8WVV4 589 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 FUBP3Q96I24 572 aaKnown RBP eCLIP6.59□□□□□ -1.35
DDB1-219ENST00000541513 IPO9Q96P70 1041 aaKnown RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 CDC6Q99741 560 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 ORAI3Q9BRQ5 295 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 NIFKQ9BYG3 293 aaKnown RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 OSBPL5Q9H0X9 879 aaPredicted RBP6.59□□□□□ -1.35
DDB1-219ENST00000541513 LIN7BQ9HAP6 207 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 C11orf16Q9NQ32 467 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 LATS2Q9NRM7 1088 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 C1orf112Q9NSG2 853 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 LRRC4BQ9NT99 713 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 ACAD8Q9UKU7 415 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 PCDHB14Q9Y5E9 798 aa6.59□□□□□ -1.35
DDB1-219ENST00000541513 SCAF11Q99590 1463 aaKnown RBP6.59□□□□□ -1.36
DDB1-219ENST00000541513 ITIH6Q6UXX5 1313 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 K7ENM7 598 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 AGRPO00253 132 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 TLR5O60602 858 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 ASLP04424 464 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 ZKSCAN1P17029 563 aaPredicted RBP6.58□□□□□ -1.36
DDB1-219ENST00000541513 CES1P23141 567 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 TXLNAP40222 546 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 HSPA2P54652 639 aa6.58□□□□□ -1.36
DDB1-219ENST00000541513 SUMO1P63165 101 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms