RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 FAM133AQ8N9E0 248 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 DCAF4Q8WV16 495 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 RILPL2Q969X0 211 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 XPNPEP3Q9NQH7 507 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 TOP1P11387 765 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 RTP1P59025 263 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 NKX3-2P78367 333 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 AKNAD1Q5T1N1 836 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 KCTD1Q719H9 257 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 ANKRD35Q8N283 1001 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 KLHDC9Q8NEP7 349 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 TMEM47Q9BQJ4 181 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 TSEN34Q9BSV6 310 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 KATNBL1Q9H079 304 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 CNPY2Q9Y2B0 182 aa15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 CTDP1Q9Y5B0 961 aaPredicted RBP15.49■□□□□ 0.07
SEMA4D-223ENST00000540475 HIP1O00291 1037 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 SOX1O00570 391 aaPredicted RBP15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 ADCYAP1R1P41586 468 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 ATN1P54259 1190 aaPredicted RBP15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 CCSAPQ6IQ19 270 aaPredicted RBP15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 RNF180Q86T96 592 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 TDHQ8IZJ6 230 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 RANBP17Q9H2T7 1088 aaKnown RBP15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 ABHD16BQ9H3Z7 469 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 ACAD9Q9H845 621 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 FAM184BQ9ULE4 1060 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 LRRC37A2A6NM11 1700 aa15.48■□□□□ 0.07
SEMA4D-223ENST00000540475 DUSP11O75319 330 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 SNHG28P0DPA3 235 aa15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 ACVR2BQ13705 512 aa15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 MFSD6Q6ZSS7 791 aa15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 RNF41Q9H4P4 317 aaPredicted RBP15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 A1CFQ9NQ94 594 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 SUPT16HQ9Y5B9 1047 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-223ENST00000540475 SOWAHBA6NEL2 793 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 PGK1P00558 417 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 ICAM1P05362 532 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 CST5P28325 142 aaPredicted RBP15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 HAND2P61296 217 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 RASGRP2Q7LDG7 609 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 TBC1D10CQ8IV04 446 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 ANKS1AQ92625 1134 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 TRERF1Q96PN7 1200 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 UPF3AQ9H1J1 476 aaKnown RBP15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 RNF146Q9NTX7 359 aa15.46■□□□□ 0.07
SEMA4D-223ENST00000540475 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 MOXD2PA6NHM9 499 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 ZNF213O14771 459 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 ADCY6O43306 1168 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 PDHBP11177 359 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 CNTN2Q02246 1040 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 RRP12Q5JTH9 1297 aaKnown RBP15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 TTBK2Q6IQ55 1244 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 CWC27Q6UX04 472 aaKnown RBP15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 ARMCX2Q7L311 632 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 DGKHQ86XP1 1220 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 CCDC144CPQ8IYA2 1237 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 MORC4Q8TE76 937 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 LRCH3Q96II8 777 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 CYP39A1Q9NYL5 469 aa15.45■□□□□ 0.06
SEMA4D-223ENST00000540475 ASTN1O14525 1302 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 LOC102724159A0A0B4J2E5 919 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 A0A1W2PQ45 241 aaPredicted RBP15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 A0A1W2PQY0 241 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 POTEB2H3BUK9 544 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 PDE4AP27815 886 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 SLC4A3P48751 1232 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 ACLYP53396 1101 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 GJA9P57773 515 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 MDM2Q00987 491 aaPredicted RBP15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 IKQ13123 557 aaPredicted RBP15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 PWP2Q15269 919 aaKnown RBP15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 CCDC144BQ3MJ40 725 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 TRIM60Q495X7 471 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 MUM1L1Q5H9M0 696 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 SYDE2Q5VT97 1194 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 ANKRD33Q7Z3H0 272 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 ESR2Q92731 530 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 FERMT2Q96AC1 680 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 TOX2Q96NM4 488 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 HOMER2Q9NSB8 354 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 PNMA2Q9UL42 364 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 ATP11BQ9Y2G3 1177 aa15.44■□□□□ 0.06
SEMA4D-223ENST00000540475 NEDD4P46934 1319 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 MYH6P13533 1939 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 ASB14A6NK59 587 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 CTAGE5O15320 804 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 ALAS1P13196 640 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 TLE2Q04725 743 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 CCDC174Q6PII3 467 aa15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 LENG1Q96BZ8 264 aaPredicted RBP15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 LBHD1Q9BQE6 289 aaPredicted RBP15.43■□□□□ 0.06
SEMA4D-223ENST00000540475 PDLIM7Q9NR12 457 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms