RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 ZKSCAN4Q969J2 545 aaPredicted RBP13.48□□□□□ -0.25
VTN-202ENST00000539746 PIGSQ96S52 555 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 GLIS2Q9BZE0 524 aaPredicted RBP13.48□□□□□ -0.25
VTN-202ENST00000539746 RANBP17Q9H2T7 1088 aaKnown RBP13.48□□□□□ -0.25
VTN-202ENST00000539746 ZCCHC17Q9NP64 241 aaKnown RBP13.48□□□□□ -0.25
VTN-202ENST00000539746 VPS54Q9P1Q0 977 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
VTN-202ENST00000539746 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
VTN-202ENST00000539746 A0A1W2PRG0 241 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 ICAM1P05362 532 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 ECE1P42892 770 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 WWC2Q6AWC2 1192 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 FERMT3Q86UX7 667 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 SIAH1Q8IUQ4 282 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 FERMT2Q96AC1 680 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 UBA5Q9GZZ9 404 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 RPAP3Q9H6T3 665 aaPredicted RBP13.47□□□□□ -0.25
VTN-202ENST00000539746 PRR12Q9ULL5 1215 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 KCNH4Q9UQ05 1017 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 SNCAIPQ9Y6H5 919 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
VTN-202ENST00000539746 A0A0G2JLL6 359 aaPredicted RBP13.46□□□□□ -0.25
VTN-202ENST00000539746 POTECB2RU33 542 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 PIK3CDO00329 1044 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 ATP2A1O14983 1001 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 PPP6R2O75170 966 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 HOXA7P31268 230 aaPredicted RBP13.46□□□□□ -0.25
VTN-202ENST00000539746 TXLNAP40222 546 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 CCNA1P78396 465 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 FSTL1Q12841 308 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 ZYXQ15942 572 aaKnown RBP13.46□□□□□ -0.25
VTN-202ENST00000539746 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.46□□□□□ -0.25
VTN-202ENST00000539746 PRRT2Q7Z6L0 340 aaPredicted RBP13.46□□□□□ -0.25
VTN-202ENST00000539746 SPICE1Q8N0Z3 855 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 ZDHHC9Q9Y397 364 aa13.46□□□□□ -0.25
VTN-202ENST00000539746 GCOM1H8Y6P7 765 aaPredicted RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 CYTH3O43739 400 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 CELF2O95319 508 aaKnown RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 SLC25A27O95847 323 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 POLR2MP0CAP2 368 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 ME1P48163 572 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 NASPP49321 788 aaPredicted RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 HMGCS2P54868 508 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 MAP1SQ66K74 1059 aaPredicted RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 ARL6IP4Q66PJ3 421 aaKnown RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 XRRA1Q6P2D8 792 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 CLEC10AQ8IUN9 316 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 NKX2-3Q8TAU0 364 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 HHIPL1Q96JK4 782 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 TEX13BQ9BXU2 312 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 SLC38A10Q9HBR0 1119 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 CCPG1Q9ULG6 757 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 AGTPBP1Q9UPW5 1226 aa13.45□□□□□ -0.26
VTN-202ENST00000539746 DDX49Q9Y6V7 483 aaKnown RBP13.45□□□□□ -0.26
VTN-202ENST00000539746 BTBD18B2RXH4 712 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 SPTLC2O15270 562 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 FIBPO43427 364 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 SLC16A2P36021 539 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 GCLCP48506 637 aaPredicted RBP13.44□□□□□ -0.26
VTN-202ENST00000539746 USP11P51784 963 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
VTN-202ENST00000539746 PKP1Q13835 747 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 PRKG1Q13976 671 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 RRP1BQ14684 758 aaKnown RBP13.44□□□□□ -0.26
VTN-202ENST00000539746 TMEM266Q2M3C6 531 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 FOXD4L5Q5VV16 416 aaPredicted RBP13.44□□□□□ -0.26
VTN-202ENST00000539746 LBX2Q6XYB7 198 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 CATSPERGQ6ZRH7 1159 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 NEK8Q86SG6 692 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 FOXD4L4Q8WXT5 416 aaPredicted RBP13.44□□□□□ -0.26
VTN-202ENST00000539746 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 ZNF408Q9H9D4 720 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 EMILIN3Q9NT22 766 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 FAM13BQ9NYF5 915 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 RCOR1Q9UKL0 485 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 SSC5DA1L4H1 1573 aa13.44□□□□□ -0.26
VTN-202ENST00000539746 PFASO15067 1338 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 LOC102724159A0A0B4J2E5 919 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 A0A1W2PQ27 194 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 A0A1W2PQ64 194 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 A0A1W2PQD8 194 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 MANSC4A6NHS7 340 aaPredicted RBP13.43□□□□□ -0.26
VTN-202ENST00000539746 SLC26A4O43511 780 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms