RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
ATL3-203ENST00000538786 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 ZBTB5O15062 677 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 ADCY7P51828 1080 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 ORC2Q13416 577 aaPredicted RBP16.82■□□□□ 0.28
ATL3-203ENST00000538786 NCAPHQ15003 741 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 DTHD1Q6ZMT9 781 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 GRAMD1CQ8IYS0 662 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 IQUBQ8NA54 791 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 FAM151AQ8WW52 585 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 COA7Q96BR5 231 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 PAGE5Q96GU1 130 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
ATL3-203ENST00000538786 CLRN2A0PK11 232 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 GDF11O95390 407 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 BMP6P22004 513 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 SLC16A2P36021 539 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 SLC1A4P43007 532 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 MORC3Q14149 939 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 E2F4Q16254 413 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
ATL3-203ENST00000538786 FKBP1CQ5VVH2 108 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 SLFN13Q68D06 897 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 GMCL1P1Q8NEA9 526 aa16.82■□□□□ 0.28
ATL3-203ENST00000538786 ZNF830Q96NB3 372 aaPredicted RBP16.82■□□□□ 0.28
ATL3-203ENST00000538786 TTC12Q9H892 705 aaPredicted RBP16.82■□□□□ 0.28
ATL3-203ENST00000538786 BIN2Q9UBW5 565 aaPredicted RBP16.82■□□□□ 0.28
ATL3-203ENST00000538786 USP17L10C9JJH3 530 aa16.81■□□□□ 0.28
ATL3-203ENST00000538786 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
ATL3-203ENST00000538786 TXLNAP40222 546 aa16.81■□□□□ 0.28
ATL3-203ENST00000538786 MYL5Q02045 173 aa16.81■□□□□ 0.28
ATL3-203ENST00000538786 MLKLQ8NB16 471 aa16.81■□□□□ 0.28
ATL3-203ENST00000538786 TMEM60Q9H2L4 133 aa16.81■□□□□ 0.28
ATL3-203ENST00000538786 RIC8AQ9NPQ8 531 aa16.81■□□□□ 0.28
ATL3-203ENST00000538786 DACH1Q9UI36 760 aa16.81■□□□□ 0.28
ATL3-203ENST00000538786 GH2P01242 217 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 CXCL9Q07325 125 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 LETM2Q2VYF4 491 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 JAKMIP3Q5VZ66 844 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 TBCKQ8TEA7 893 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 TAOK3Q9H2K8 898 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATL3-203ENST00000538786 SYNPO2Q9UMS6 1093 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 CNTNAP1P78357 1384 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 F5H6K3 240 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
ATL3-203ENST00000538786 AFMP43652 599 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 KLRC3Q07444 240 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 GMCL1Q96IK5 515 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 TMEM260Q9NX78 707 aa16.8■□□□□ 0.28
ATL3-203ENST00000538786 MYO1BO43795 1136 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 NEMFO60524 1076 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 OR52Z1P0C646 297 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 JAG1P78504 1218 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 DPYDQ12882 1025 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 RRP1BQ14684 758 aaKnown RBP16.79■□□□□ 0.28
ATL3-203ENST00000538786 PDXDC2PQ6P474 469 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 JDP2Q8WYK2 163 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
ATL3-203ENST00000538786 RAD21O60216 631 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
ATL3-203ENST00000538786 CIAPIN1Q6FI81 312 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 CCDC186Q7Z3E2 898 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 ZBED3Q96IU2 234 aaPredicted RBP16.78■□□□□ 0.28
ATL3-203ENST00000538786 AK8Q96MA6 479 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 KCNF1Q9H3M0 494 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 NDUFB10O96000 172 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 PTGS1P23219 599 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
ATL3-203ENST00000538786 FAM83AQ86UY5 434 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATL3-203ENST00000538786 CUL5Q93034 780 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 CCSER1Q9C0I3 900 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 HSD3B7Q9H2F3 369 aa16.78■□□□□ 0.28
ATL3-203ENST00000538786 CLK2P49760 499 aaKnown RBP16.77■□□□□ 0.28
ATL3-203ENST00000538786 MMP14P50281 582 aa16.77■□□□□ 0.28
ATL3-203ENST00000538786 QRICH1Q2TAL8 776 aa16.77■□□□□ 0.28
ATL3-203ENST00000538786 GLT8D2Q9H1C3 349 aa16.77■□□□□ 0.28
ATL3-203ENST00000538786 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
ATL3-203ENST00000538786 DISC1Q9NRI5 854 aa16.77■□□□□ 0.28
ATL3-203ENST00000538786 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
ATL3-203ENST00000538786 TBC1D12O60347 775 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
ATL3-203ENST00000538786 CDC25AP30304 524 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 UBA7P41226 1012 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 KARSQ15046 597 aaKnown RBP16.76■□□□□ 0.27
ATL3-203ENST00000538786 CDC37Q16543 378 aaPredicted RBP16.76■□□□□ 0.27
ATL3-203ENST00000538786 PSTPIP2Q9H939 334 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 ERCC5P28715 1186 aaPredicted RBP16.76■□□□□ 0.27
ATL3-203ENST00000538786 STAT6P42226 847 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 TNIP1Q15025 636 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 ENOX1Q8TC92 643 aaKnown RBP16.76■□□□□ 0.27
ATL3-203ENST00000538786 IFNKQ9P0W0 207 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 CD2APQ9Y5K6 639 aa16.76■□□□□ 0.27
ATL3-203ENST00000538786 NFKBIEO00221 500 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms