RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 MYH8P13535 1937 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 CCP110O43303 1012 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 ECE2O60344 883 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 CCNT1O60563 726 aaKnown RBP17.7■□□□□ 0.42
MKS1-204ENST00000537529 RPN1P04843 607 aaKnown RBP17.7■□□□□ 0.42
MKS1-204ENST00000537529 ADCY7P51828 1080 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 LETM2Q2VYF4 491 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 SPECC1LQ69YQ0 1117 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 MTRQ99707 1265 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 GPCPD1Q9NPB8 672 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 TRMT1Q9NXH9 659 aaKnown RBP17.7■□□□□ 0.42
MKS1-204ENST00000537529 MPHOSPH10O00566 681 aaKnown RBP17.7■□□□□ 0.42
MKS1-204ENST00000537529 MYL1P05976 194 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 RXRBP28702 533 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 NFIAQ12857 509 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 E4F1Q66K89 784 aaPredicted RBP17.7■□□□□ 0.42
MKS1-204ENST00000537529 CLEC10AQ8IUN9 316 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 SMYD4Q8IYR2 804 aaPredicted RBP17.7■□□□□ 0.42
MKS1-204ENST00000537529 CNKSR1Q969H4 720 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 DHX36Q9H2U1 1008 aaKnown RBP17.7■□□□□ 0.42
MKS1-204ENST00000537529 CUEDC2Q9H467 287 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 MAGEF1Q9HAY2 307 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 CTNND2Q9UQB3 1225 aa17.7■□□□□ 0.42
MKS1-204ENST00000537529 A0A1B0GTH6 734 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 CDC25AP30304 524 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 STX17P56962 302 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 TBX2Q13207 712 aaPredicted RBP17.69■□□□□ 0.42
MKS1-204ENST00000537529 DACT2Q5SW24 774 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 GPATCH4Q5T3I0 446 aaKnown RBP17.69■□□□□ 0.42
MKS1-204ENST00000537529 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
MKS1-204ENST00000537529 CDKAL1Q5VV42 579 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 KIAA0825Q8IV33 1275 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 TBCKQ8TEA7 893 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 CTAGE1Q96RT6 745 aa17.69■□□□□ 0.42
MKS1-204ENST00000537529 PP2D1A8MPX8 630 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
MKS1-204ENST00000537529 SEMA3FQ13275 785 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 JAKMIP3Q5VZ66 844 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 KCNQ5Q9NR82 932 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 BIN2Q9UBW5 565 aaPredicted RBP17.68■□□□□ 0.42
MKS1-204ENST00000537529 RWDD2AQ9UIY3 292 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 PNMA6FA0A0J9YX94 578 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 RBM5P52756 815 aaKnown RBP eCLIP17.68■□□□□ 0.42
MKS1-204ENST00000537529 NR1I3Q14994 352 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 PPP1R13BQ96KQ4 1090 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 IDI2Q9BXS1 227 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
MKS1-204ENST00000537529 GREB1LQ9C091 1923 aaPredicted RBP17.68■□□□□ 0.42
MKS1-204ENST00000537529 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 PAK1Q13153 545 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 NAALADL2Q58DX5 795 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 CABP7Q86V35 215 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 FCHSD1Q86WN1 690 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 EP400Q96L91 3159 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
MKS1-204ENST00000537529 RBM10P98175 930 aaKnown RBP17.67■□□□□ 0.42
MKS1-204ENST00000537529 KCNB1Q14721 858 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 FILIP1LQ4L180 1135 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 ADGRF4Q8IZF3 695 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 ZNF592Q92610 1267 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 COA7Q96BR5 231 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 TRIM34Q9BYJ4 488 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 TMEM260Q9NX78 707 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
MKS1-204ENST00000537529 SERPINA10Q9UK55 444 aa17.67■□□□□ 0.42
MKS1-204ENST00000537529 ZFPM1Q8IX07 1006 aa17.66■□□□□ 0.42
MKS1-204ENST00000537529 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
MKS1-204ENST00000537529 MAP7D2Q96T17 732 aa17.66■□□□□ 0.42
MKS1-204ENST00000537529 RIC8AQ9NPQ8 531 aa17.66■□□□□ 0.42
MKS1-204ENST00000537529 TUBB4AP04350 444 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 CHRNA5P30532 468 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 SPAG1Q07617 926 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 PTPN21Q16825 1174 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 CC2D2BQ6DHV5 1058 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 APTXQ7Z2E3 356 aaKnown RBP17.65■□□□□ 0.42
MKS1-204ENST00000537529 MTERF4Q7Z6M4 381 aaKnown RBP17.65■□□□□ 0.42
MKS1-204ENST00000537529 NELFBQ8WX92 580 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 KBTBD4Q9NVX7 518 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 PI4KBQ9UBF8 816 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 SLX4Q8IY92 1834 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 ARHGAP6O43182 974 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 PLCG1P19174 1290 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 TCP10Q12799 353 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
MKS1-204ENST00000537529 ANKRD20A12PQ8NF67 263 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 KIF18AQ8NI77 898 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 DNAJC18Q9H819 358 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 STK32BQ9NY57 414 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 ADD3Q9UEY8 706 aaKnown RBP17.65■□□□□ 0.42
MKS1-204ENST00000537529 FAM198AQ9UFP1 575 aa17.65■□□□□ 0.42
MKS1-204ENST00000537529 CTIFO43310 598 aaKnown RBP17.64■□□□□ 0.41
MKS1-204ENST00000537529 CACNB3P54284 484 aa17.64■□□□□ 0.41
MKS1-204ENST00000537529 SLC15A2Q16348 729 aa17.64■□□□□ 0.41
MKS1-204ENST00000537529 AOC3Q16853 763 aa17.64■□□□□ 0.41
MKS1-204ENST00000537529 CERKLQ49MI3 558 aaPredicted RBP17.64■□□□□ 0.41
MKS1-204ENST00000537529 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms