RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CTAGE4Q8IX94 777 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 CABLES1Q8TDN4 633 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 RBM41Q96IZ5 413 aaKnown RBP4.17□□□□□ -1.74
MCF2-210ENST00000536274 TSC22D3Q99576 134 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 SYT17Q9BSW7 474 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 SCAND2PQ9GZW5 306 aaPredicted RBP4.17□□□□□ -1.74
MCF2-210ENST00000536274 LSG1Q9H089 658 aaKnown RBP4.17□□□□□ -1.74
MCF2-210ENST00000536274 PREBQ9HCU5 417 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 PANK4Q9NVE7 773 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 EHD2Q9NZN4 543 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 MRC1P22897 1456 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 ATP6V1G2O95670 118 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 C2orf54Q08AI8 447 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 ZNF827Q17R98 1081 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 CCDC73Q6ZRK6 1079 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 TBC1D1Q86TI0 1168 aaPredicted RBP4.17□□□□□ -1.74
MCF2-210ENST00000536274 TC2NQ8N9U0 490 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 MARCH10Q8NA82 808 aaPredicted RBP4.17□□□□□ -1.74
MCF2-210ENST00000536274 SMARCC2Q8TAQ2 1214 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 FAM81AQ8TBF8 368 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 AGAP11Q8TF27 550 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 COG1Q8WTW3 980 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 C8orf76Q96K31 380 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 CFAP53Q96M91 514 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 PSMB7Q99436 277 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 SLX1AQ9BQ83 275 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 RGL1Q9NZL6 768 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 RABGEF1Q9UJ41 708 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 ANAPC4Q9UJX5 808 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 MYO6Q9UM54 1294 aa4.17□□□□□ -1.74
MCF2-210ENST00000536274 BZW2Q9Y6E2 419 aaKnown RBP4.17□□□□□ -1.74
MCF2-210ENST00000536274 H3BQV1 296 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SMAPO00193 183 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 PES1O00541 588 aaKnown RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 RAB11FIP3O75154 756 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 CHGBP05060 677 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 TMOD1P28289 359 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 CDC27P30260 824 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 CDC25AP30304 524 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 LSP1P33241 339 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 PRPHP41219 470 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 PDE4BQ07343 736 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 DBN1Q16643 649 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 AMOTQ4VCS5 1084 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 G2E3Q7L622 706 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ABTB2Q8N961 1025 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SLC17A8Q8NDX2 589 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 CCT8L2Q96SF2 557 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 OSBPL1AQ9BXW6 950 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 GBP3Q9H0R5 595 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SERPINA10Q9UK55 444 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 C2CD2Q9Y426 696 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 MINK1Q8N4C8 1332 aaPredicted RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 UBR2Q8IWV8 1755 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 FOXN1O15353 648 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 TEX33O43247 280 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 HRO43593 1189 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 POLR3DP05423 398 aaPredicted RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 IL2RBP14784 551 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 EIF4BP23588 611 aaKnown RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 PRKAR2BP31323 418 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ELF3P78545 371 aaPredicted RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 RESTQ13127 1097 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ALDH1L2Q3SY69 923 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SFMBT2Q5VUG0 894 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 NUGGCQ68CJ6 796 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 CCDC121Q6ZUS5 278 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 RAB11FIP4Q86YS3 637 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 MAB21L3Q8N8X9 362 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ACSBG1Q96GR2 724 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 GORASP1Q9BQQ3 440 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 BRD8Q9H0E9 1235 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 TBC1D7Q9P0N9 293 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 TIAM2Q8IVF5 1701 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SCN7AQ01118 1682 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 TJP1Q07157 1748 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 MAFGO15525 162 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ARHGAP6O43182 974 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ZPR1O75312 459 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SPATA31D3P0C874 917 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 NEFHP12036 1026 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ADD1P35611 737 aaKnown RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 MAGEA8P43361 318 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SCTRP47872 440 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 AARSP49588 968 aaKnown RBP eCLIP4.16□□□□□ -1.74
MCF2-210ENST00000536274 APLP1P51693 650 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 PNOCQ13519 176 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 MYBPC3Q14896 1274 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 LRRC23Q53EV4 343 aaPredicted RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 LMBRD2Q68DH5 695 aaPredicted RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 RCSD1Q6JBY9 416 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 SPATA31D4Q6ZUB0 917 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 KIAA1328Q86T90 577 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 NLRP14Q86W24 1093 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 LONP2Q86WA8 852 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ERICH1Q86X53 443 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 VSTM4Q8IW00 320 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ENGASEQ8NFI3 743 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 TRIM58Q8NG06 486 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 MYCBPAPQ8TBZ2 947 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms