RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 RXRAP19793 462 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CYP2B6P20813 491 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RPS6KB1P23443 525 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ADORA2AP29274 412 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 GRK4P32298 578 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MAP2K5Q13163 448 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CCL14Q16627 93 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SLC9C1Q4G0N8 1177 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 BLOC1S2Q6QNY1 142 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 TRIB2Q92519 343 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ZNF333Q96JL9 665 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 BRPF3Q9ULD4 1205 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CTDP1Q9Y5B0 961 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 KLRF2D3W0D1 207 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CYTH3O43739 400 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 STRNO43815 780 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 XRCC5P13010 732 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 RGS2P41220 211 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MUM1L1Q5H9M0 696 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ABRAQ8N0Z2 381 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 TMTC2Q8N394 836 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 SLAIN1Q8ND83 568 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 PXYLP1Q8TE99 480 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MAP3K14Q99558 947 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 APBA2Q99767 749 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 AGXT2Q9BYV1 514 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MCM3APO60318 1980 aa13.2□□□□□ -0.3
TNFRSF1A-208ENST00000536194 IGHA2P01877 340 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 PGK2P07205 417 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 HOXC6P09630 235 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FCER1AP12319 257 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ALAS1P13196 640 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 PSMA5P28066 241 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 COPB2P35606 906 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 TRIM32Q13049 653 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CDC37Q16543 378 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 Q6ZUG5 572 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 RUFY3Q7L099 469 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MTMR8Q96EF0 704 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MMP19Q99542 508 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 UPF3BQ9BZI7 483 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 RIOX1Q9H6W3 641 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 VAT1LQ9HCJ6 419 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 RNF146Q9NTX7 359 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 PPP1R11O60927 126 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 PLEKHA8P1O95397 391 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MYCP01106 439 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 INHAP05111 366 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 APOBRQ0VD83 1088 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 TOB2Q14106 344 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MTFR1Q15390 333 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 QRICH1Q2TAL8 776 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FBXL16Q8N461 479 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FGD4Q96M96 766 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
TNFRSF1A-208ENST00000536194 LRRC37A2A6NM11 1700 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 KLF18A0A0U1RQI7 1052 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 NFIBO00712 420 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 HMGCRP04035 888 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ANAPC15P60006 121 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ZNF792Q3KQV3 632 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 USH1GQ495M9 461 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CMTR1Q8N1G2 835 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FANCBQ8NB91 859 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CLEC4DQ8WXI8 215 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 BRF1Q92994 677 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
TNFRSF1A-208ENST00000536194 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms