RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SOX10P56693 466 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 ERVK-24P63145 666 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 RGL3Q3MIN7 710 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 CXorf38Q8TB03 319 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 GTF3C2Q8WUA4 911 aaPredicted RBP5.88□□□□□ -1.47
YBX3-205ENST00000536107 FOXQ1Q9C009 403 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 MCOLN1Q9GZU1 580 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 MAPK8IP1Q9UQF2 711 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 EIF3AQ14152 1382 aaKnown RBP5.88□□□□□ -1.47
YBX3-205ENST00000536107 C10orf71Q711Q0 1435 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 YTHDC2Q9H6S0 1430 aaKnown RBP5.88□□□□□ -1.47
YBX3-205ENST00000536107 EOMESO95936 686 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 RAC2P15153 192 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 NFKB2Q00653 900 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 ZC3H12AQ5D1E8 599 aaKnown RBP5.87□□□□□ -1.47
YBX3-205ENST00000536107 PRRT2Q7Z6L0 340 aaPredicted RBP5.87□□□□□ -1.47
YBX3-205ENST00000536107 SLC17A8Q8NDX2 589 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 BAHD1Q8TBE0 780 aaPredicted RBP5.87□□□□□ -1.47
YBX3-205ENST00000536107 ALPK1Q96QP1 1244 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 WDR17Q8IZU2 1322 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 LRRC37A3O60309 1634 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 PAPPAQ13219 1627 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 SBF2Q86WG5 1849 aa5.87□□□□□ -1.47
YBX3-205ENST00000536107 ALS2Q96Q42 1657 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 PXDNLA1KZ92 1463 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 PRR36Q9H6K5 1346 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 FAM13AO94988 1023 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 SKOR2Q2VWA4 1001 aaPredicted RBP5.86□□□□□ -1.47
YBX3-205ENST00000536107 HABP4Q5JVS0 413 aaKnown RBP5.86□□□□□ -1.47
YBX3-205ENST00000536107 SMIM5Q71RC9 77 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 HSPA12BQ96MM6 686 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 EHD4Q9H223 541 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 TMPRSS5Q9H3S3 457 aa5.86□□□□□ -1.47
YBX3-205ENST00000536107 PRDM5Q9NQX1 630 aaPredicted RBP5.86□□□□□ -1.47
YBX3-205ENST00000536107 TRPM3Q9HCF6 1732 aaPredicted RBP5.85□□□□□ -1.47
YBX3-205ENST00000536107 CNTNAP4Q9C0A0 1308 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 TMEM88BA6NKF7 163 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 DPEP1P16444 411 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 TGFB2P61812 414 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 FAAP100Q0VG06 881 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 GRM1Q13255 1194 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 PDZD3Q86UT5 571 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 ABCB6Q9NP58 842 aa5.85□□□□□ -1.47
YBX3-205ENST00000536107 PDE4DIPQ5VU43 2346 aa5.84□□□□□ -1.47
YBX3-205ENST00000536107 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.84□□□□□ -1.47
YBX3-205ENST00000536107 GLTPD2A6NH11 291 aa5.84□□□□□ -1.47
YBX3-205ENST00000536107 ADRB1P08588 477 aa5.84□□□□□ -1.47
YBX3-205ENST00000536107 HMGB2P26583 209 aaKnown RBP5.84□□□□□ -1.47
YBX3-205ENST00000536107 ZNF157P51786 506 aaPredicted RBP5.84□□□□□ -1.47
YBX3-205ENST00000536107 MTMR3Q13615 1198 aa5.84□□□□□ -1.47
YBX3-205ENST00000536107 DEFB115Q30KQ5 88 aa5.84□□□□□ -1.47
YBX3-205ENST00000536107 DALRD3Q5D0E6 543 aaKnown RBP5.84□□□□□ -1.47
YBX3-205ENST00000536107 PRPF40BQ6NWY9 871 aaKnown RBP5.84□□□□□ -1.47
YBX3-205ENST00000536107 C22orf34Q6ZV56 151 aa5.84□□□□□ -1.47
YBX3-205ENST00000536107 RGPD8O14715 1765 aaPredicted RBP5.84□□□□□ -1.47
YBX3-205ENST00000536107 TNRC18O15417 2968 aaPredicted RBP5.84□□□□□ -1.48
YBX3-205ENST00000536107 CCDC7Q96M83 1385 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 ACEP12821 1306 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 WDR33Q9C0J8 1336 aaKnown RBP5.83□□□□□ -1.48
YBX3-205ENST00000536107 PSPNO60542 156 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 MMP10P09238 476 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 IL2RBP14784 551 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 ITGAEP38570 1179 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 TCERG1LQ5VWI1 586 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 USPL1Q5W0Q7 1092 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 TTC6Q86TZ1 520 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 MYLIPQ8WY64 445 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 KCNB2Q92953 911 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 NLRP2Q9NX02 1062 aa5.83□□□□□ -1.48
YBX3-205ENST00000536107 ABT1Q9ULW3 272 aaKnown RBP5.83□□□□□ -1.48
YBX3-205ENST00000536107 CICQ96RK0 1608 aaPredicted RBP5.82□□□□□ -1.48
YBX3-205ENST00000536107 FAM155AB1AL88 458 aaPredicted RBP5.82□□□□□ -1.48
YBX3-205ENST00000536107 PRKCSHP14314 528 aaPredicted RBP5.82□□□□□ -1.48
YBX3-205ENST00000536107 NTF4P34130 210 aa5.82□□□□□ -1.48
YBX3-205ENST00000536107 DLG4P78352 724 aa5.82□□□□□ -1.48
YBX3-205ENST00000536107 CCDC87Q9NVE4 849 aa5.82□□□□□ -1.48
YBX3-205ENST00000536107 TRAK1Q9UPV9 953 aa5.82□□□□□ -1.48
YBX3-205ENST00000536107 IFT172Q9UG01 1749 aa5.82□□□□□ -1.48
YBX3-205ENST00000536107 PPIP5K1Q6PFW1 1433 aa5.82□□□□□ -1.48
YBX3-205ENST00000536107 NHSQ6T4R5 1651 aa5.82□□□□□ -1.48
YBX3-205ENST00000536107 USP47Q96K76 1375 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 TMEM238LA0A1B0GVL6 79 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 TRIM13O60858 407 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 SEMA7AO75326 666 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 HPXP02790 462 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 NEFLP07196 543 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 THAP5Q7Z6K1 395 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 MFSD4AQ8N468 514 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 XYLT2Q9H1B5 865 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 SLAMF8Q9P0V8 285 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 ST14Q9Y5Y6 855 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 COL24A1Q17RW2 1714 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 CRYBG1Q9Y4K1 1723 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 LMO7Q8WWI1 1683 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 VPS8Q8N3P4 1428 aa5.81□□□□□ -1.48
YBX3-205ENST00000536107 H3BS24 57 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 PEX10O60683 326 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 CELA3BP08861 270 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 LMNB1P20700 586 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms