RNA–Protein interactions for RNA: ENST00000536072.6

EDC4-202, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-202ENST00000536072 SHROOM1Q2M3G4 852 aaPredicted RBP18.77■□□□□ 0.6
EDC4-202ENST00000536072 TTBK2Q6IQ55 1244 aa18.77■□□□□ 0.6
EDC4-202ENST00000536072 PYM1Q9BRP8 204 aaKnown RBP18.77■□□□□ 0.6
EDC4-202ENST00000536072 FAM198AQ9UFP1 575 aa18.77■□□□□ 0.6
EDC4-202ENST00000536072 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.6
EDC4-202ENST00000536072 STAT6P42226 847 aa18.77■□□□□ 0.6
EDC4-202ENST00000536072 ZNF543Q08ER8 600 aa18.77■□□□□ 0.6
EDC4-202ENST00000536072 VSTM4Q8IW00 320 aa18.77■□□□□ 0.6
EDC4-202ENST00000536072 PRIMPOLQ96LW4 560 aa18.77■□□□□ 0.6
EDC4-202ENST00000536072 FKBP1AP62942 108 aaKnown RBP18.76■□□□□ 0.59
EDC4-202ENST00000536072 REXO1Q8N1G1 1221 aaKnown RBP18.76■□□□□ 0.59
EDC4-202ENST00000536072 CAMKK2Q96RR4 588 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 MRIQ9BWK5 157 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 EHD4Q9H223 541 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 DISC1Q9NRI5 854 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 STK32BQ9NY57 414 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 PPP1R3GB7ZBB8 358 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 GTPBP6O43824 516 aaPredicted RBP18.76■□□□□ 0.59
EDC4-202ENST00000536072 SH3BP5LQ7L8J4 393 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 NEK8Q86SG6 692 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 ZSCAN29Q8IWY8 852 aaPredicted RBP18.76■□□□□ 0.59
EDC4-202ENST00000536072 ADGRF4Q8IZF3 695 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 MYRIPQ8NFW9 859 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 RASSF8Q8NHQ8 419 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 TBCKQ8TEA7 893 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 PLIN2Q99541 437 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 JMJD4Q9H9V9 463 aa18.76■□□□□ 0.59
EDC4-202ENST00000536072 SLC16A2P36021 539 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 KCTD1Q719H9 257 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 PDGFDQ9GZP0 370 aaPredicted RBP18.75■□□□□ 0.59
EDC4-202ENST00000536072 TRMT1Q9NXH9 659 aaKnown RBP18.75■□□□□ 0.59
EDC4-202ENST00000536072 SYNRGQ9UMZ2 1314 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 ESYT2A0FGR8 921 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 LAD1O00515 517 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 UBA7P41226 1012 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 HDLBPQ00341 1268 aaKnown RBP18.75■□□□□ 0.59
EDC4-202ENST00000536072 NAALADL2Q58DX5 795 aa18.75■□□□□ 0.59
EDC4-202ENST00000536072 RGS17Q9UGC6 210 aaPredicted RBP18.75■□□□□ 0.59
EDC4-202ENST00000536072 C21orf2O43822 256 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 COBLO75128 1261 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 OR52Z1P0C646 297 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 TNNT1P13805 278 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 PRPHP41219 470 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 GOLGA8FQ08AF8 430 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 GOLGA8DPQ0D2H9 430 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 RRAGBQ5VZM2 374 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 IDI2Q9BXS1 227 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 DHX36Q9H2U1 1008 aaKnown RBP18.74■□□□□ 0.59
EDC4-202ENST00000536072 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 RAD21O60216 631 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 PPP1R11O60927 126 aaPredicted RBP18.74■□□□□ 0.59
EDC4-202ENST00000536072 ADCY7P51828 1080 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 CT47A1Q5JQC4 288 aaPredicted RBP18.74■□□□□ 0.59
EDC4-202ENST00000536072 SPATA1Q5VX52 437 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 POTEAQ6S8J7 498 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
EDC4-202ENST00000536072 CCDC17Q96LX7 622 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 PI4KBQ9UBF8 816 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 SERPINA10Q9UK55 444 aa18.74■□□□□ 0.59
EDC4-202ENST00000536072 CERKLQ49MI3 558 aaPredicted RBP18.73■□□□□ 0.59
EDC4-202ENST00000536072 TDRD3Q9H7E2 651 aaKnown RBP18.73■□□□□ 0.59
EDC4-202ENST00000536072 CTNND2Q9UQB3 1225 aa18.73■□□□□ 0.59
EDC4-202ENST00000536072 RGPD3A6NKT7 1758 aaPredicted RBP18.73■□□□□ 0.59
EDC4-202ENST00000536072 RGPD4Q7Z3J3 1758 aa18.73■□□□□ 0.59
EDC4-202ENST00000536072 PNMA6FA0A0J9YX94 578 aa18.73■□□□□ 0.59
EDC4-202ENST00000536072 YDJCA8MPS7 323 aa18.73■□□□□ 0.59
EDC4-202ENST00000536072 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
EDC4-202ENST00000536072 RPN1P04843 607 aaKnown RBP18.73■□□□□ 0.59
EDC4-202ENST00000536072 CCAR2Q8N163 923 aaKnown RBP18.73■□□□□ 0.59
EDC4-202ENST00000536072 LRRC15Q8TF66 581 aa18.73■□□□□ 0.59
EDC4-202ENST00000536072 CCSER1Q9C0I3 900 aa18.73■□□□□ 0.59
EDC4-202ENST00000536072 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
EDC4-202ENST00000536072 EEF2P13639 858 aaKnown RBP18.72■□□□□ 0.59
EDC4-202ENST00000536072 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
EDC4-202ENST00000536072 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
EDC4-202ENST00000536072 SIPA1L1O43166 1804 aa18.72■□□□□ 0.59
EDC4-202ENST00000536072 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
EDC4-202ENST00000536072 GPATCH4Q5T3I0 446 aaKnown RBP18.71■□□□□ 0.59
EDC4-202ENST00000536072 C10orf71Q711Q0 1435 aa18.71■□□□□ 0.59
EDC4-202ENST00000536072 GREB1LQ9C091 1923 aaPredicted RBP18.71■□□□□ 0.59
EDC4-202ENST00000536072 TECP42680 631 aa18.71■□□□□ 0.59
EDC4-202ENST00000536072 DHX8Q14562 1220 aaKnown RBP18.71■□□□□ 0.59
EDC4-202ENST00000536072 UBE2SQ16763 222 aa18.71■□□□□ 0.59
EDC4-202ENST00000536072 E4F1Q66K89 784 aaPredicted RBP18.71■□□□□ 0.59
EDC4-202ENST00000536072 CABP7Q86V35 215 aa18.71■□□□□ 0.59
EDC4-202ENST00000536072 RIOK3O14730 519 aaKnown RBP18.7■□□□□ 0.58
EDC4-202ENST00000536072 TSC1Q92574 1164 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 PRMT6Q96LA8 375 aaPredicted RBP18.7■□□□□ 0.58
EDC4-202ENST00000536072 MAPK8IP1Q9UQF2 711 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 GDAQ9Y2T3 454 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 MYH4Q9Y623 1939 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 DYNC1I1O14576 645 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 EDIL3O43854 480 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 GDF11O95390 407 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 PLCG1P19174 1290 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 NR1I3Q14994 352 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 SEPT2Q15019 361 aa18.7■□□□□ 0.58
EDC4-202ENST00000536072 ZNF658Q5TYW1 1059 aaPredicted RBP18.7■□□□□ 0.58
EDC4-202ENST00000536072 APTXQ7Z2E3 356 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms