RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 MKRN1Q9UHC7 482 aaKnown RBP15□□□□□ -0.01
HDAC4-214ENST00000535493 PNPLA7Q6ZV29 1317 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 CNTNAP5Q8WYK1 1306 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 MYH6P13533 1939 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 KRT86O43790 486 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 CYP19A1P11511 503 aaPredicted RBP15□□□□□ -0.01
HDAC4-214ENST00000535493 FCER1AP12319 257 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 AARSP49588 968 aaKnown RBP eCLIP15□□□□□ -0.01
HDAC4-214ENST00000535493 CHRNDQ07001 517 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 CT47A1Q5JQC4 288 aaPredicted RBP15□□□□□ -0.01
HDAC4-214ENST00000535493 PAPD7Q5XG87 772 aaKnown RBP15□□□□□ -0.01
HDAC4-214ENST00000535493 TYW1BQ6NUM6 668 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 NFRKBQ6P4R8 1299 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 CAPN11Q9UMQ6 739 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 NID2Q14112 1375 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 H7C1D1 291 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 EXOC5O00471 708 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 MOCS3O95396 460 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 STAG2Q8N3U4 1231 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 CTCFLQ8NI51 663 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-214ENST00000535493 ZNF384Q8TF68 577 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 RTL9Q8NET4 1388 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 EPHB6O15197 1021 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 SCG2P13521 617 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 TRIM14Q14142 442 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 CCDC178Q5BJE1 867 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 SH2D3CQ8N5H7 860 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 FAM76AQ8TAV0 307 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 DISC1Q9NRI5 854 aa14.99□□□□□ -0.01
HDAC4-214ENST00000535493 FAM207AQ9NSI2 230 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-214ENST00000535493 ALS2Q96Q42 1657 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 MYH10P35580 1976 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 IRAK1P51617 712 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 STK4Q13043 487 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 INF2Q27J81 1249 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 MAP9Q49MG5 647 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 BCAS4Q8TDM0 211 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 ARL8AQ96BM9 186 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 MAGEC2Q9UBF1 373 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-214ENST00000535493 CHD4Q14839 1912 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 IPO7O95373 1038 aaKnown RBP14.98□□□□□ -0.01
HDAC4-214ENST00000535493 MTIF2P46199 727 aaKnown RBP14.98□□□□□ -0.01
HDAC4-214ENST00000535493 ATP1A2P50993 1020 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 RNASE9P60153 205 aaKnown RBP14.98□□□□□ -0.01
HDAC4-214ENST00000535493 TUBB4BP68371 445 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 ICE2Q659A1 982 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 ANKRD40Q6AI12 368 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 MSL3Q8N5Y2 521 aaKnown RBP14.98□□□□□ -0.01
HDAC4-214ENST00000535493 DUSP9Q99956 384 aaKnown RBP14.98□□□□□ -0.01
HDAC4-214ENST00000535493 RIOK1Q9BRS2 568 aaKnown RBP14.98□□□□□ -0.01
HDAC4-214ENST00000535493 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
HDAC4-214ENST00000535493 ESYT3A0FGR9 886 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 ZSCAN5CA6NGD5 496 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-214ENST00000535493 FBXW10Q5XX13 1052 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 CREG2Q8IUH2 290 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 C4orf32Q8N8J7 132 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 TSEN2Q8NCE0 465 aaKnown RBP14.97□□□□□ -0.01
HDAC4-214ENST00000535493 KAT2BQ92831 832 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 MS4A14Q96JA4 679 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
HDAC4-214ENST00000535493 KLRC4O43908 158 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 UBA7P41226 1012 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 KRT83P78385 493 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 KIF5AQ12840 1032 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 TMC4Q7Z404 712 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 C2CD5Q86YS7 1000 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 SECISBP2LQ93073 1101 aaKnown RBP14.97□□□□□ -0.01
HDAC4-214ENST00000535493 VIPAS39Q9H9C1 493 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 EXOC1Q9NV70 894 aa14.97□□□□□ -0.01
HDAC4-214ENST00000535493 ZNHIT6Q9NWK9 470 aaKnown RBP14.97□□□□□ -0.01
HDAC4-214ENST00000535493 BMP15O95972 392 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 KRT14P02533 472 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 GNGT1P63211 74 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 TTI2Q6NXR4 508 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 CCDC155Q8N6L0 562 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 PPM1EQ8WY54 764 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 CNOT6LQ96LI5 555 aaKnown RBP14.96□□□□□ -0.01
HDAC4-214ENST00000535493 CCDC42Q96M95 316 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 NOC4LQ9BVI4 516 aaKnown RBP14.96□□□□□ -0.01
HDAC4-214ENST00000535493 RMND1Q9NWS8 449 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 SALL4Q9UJQ4 1053 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 PDS5AQ29RF7 1337 aaKnown RBP14.96□□□□□ -0.01
HDAC4-214ENST00000535493 PSMA7O14818 248 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 BUB1O43683 1085 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 CYLC1P35663 651 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-214ENST00000535493 DTHD1Q6ZMT9 781 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 TNS2Q63HR2 1409 aa14.96□□□□□ -0.01
HDAC4-214ENST00000535493 BCL9LQ86UU0 1499 aa14.96□□□□□ -0.02
HDAC4-214ENST00000535493 MYH13Q9UKX3 1938 aa14.96□□□□□ -0.02
HDAC4-214ENST00000535493 TUBBP07437 444 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 KLRK1P26718 216 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 IGHMBP2P38935 993 aaKnown RBP14.95□□□□□ -0.02
HDAC4-214ENST00000535493 PDCLQ13371 301 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 TADA2BQ86TJ2 420 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 TTYH3Q9C0H2 523 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 FAM169AQ9Y6X4 670 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 TSPY2A6NKD2 308 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 ZEB2O60315 1214 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 GOLGA8HP0CJ92 632 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 SRGNP10124 158 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms