RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 FGD4Q96M96 766 aa22.26■■□□□ 1.15
NDUFS3-213ENST00000534716 FAM184BQ9ULE4 1060 aa22.26■■□□□ 1.15
NDUFS3-213ENST00000534716 PLXNA1Q9UIW2 1896 aa22.26■■□□□ 1.15
NDUFS3-213ENST00000534716 KCTD1Q719H9 257 aa22.25■■□□□ 1.15
NDUFS3-213ENST00000534716 SLC17A8Q8NDX2 589 aa22.25■■□□□ 1.15
NDUFS3-213ENST00000534716 DCAF4Q8WV16 495 aa22.25■■□□□ 1.15
NDUFS3-213ENST00000534716 TSEN34Q9BSV6 310 aaKnown RBP22.25■■□□□ 1.15
NDUFS3-213ENST00000534716 ACAD9Q9H845 621 aa22.25■■□□□ 1.15
NDUFS3-213ENST00000534716 ADAMTS4O75173 837 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 SLC4A3P48751 1232 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 NT5C2P49902 561 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 IKQ13123 557 aaPredicted RBP22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 LRCH3Q96II8 777 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 AGBL1Q96MI9 1066 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 ABHD16BQ9H3Z7 469 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 PRR12Q9ULL5 1215 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 ATP11BQ9Y2G3 1177 aa22.24■■□□□ 1.15
NDUFS3-213ENST00000534716 PGK1P00558 417 aa22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 MYCNP04198 464 aaPredicted RBP22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 TOP1P11387 765 aaKnown RBP22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 MDM2Q00987 491 aaPredicted RBP22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 ACVR2BQ13705 512 aa22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 BTNL9Q6UXG8 535 aa22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 FAM133AQ8N9E0 248 aa22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 PRKAG2Q9UGJ0 569 aa22.23■■□□□ 1.15
NDUFS3-213ENST00000534716 DUSP11O75319 330 aaKnown RBP22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 AKNAD1Q5T1N1 836 aa22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 KLHDC9Q8NEP7 349 aa22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 FERMT2Q96AC1 680 aa22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 TTC14Q96N46 770 aa22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 LBHD1Q9BQE6 289 aaPredicted RBP22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 TMEM47Q9BQJ4 181 aa22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 A1CFQ9NQ94 594 aaKnown RBP22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 HOMER2Q9NSB8 354 aa22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 RNF146Q9NTX7 359 aa22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 ISY1Q9ULR0 285 aaKnown RBP22.22■■□□□ 1.15
NDUFS3-213ENST00000534716 POTEB2H3BUK9 544 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 HIP1O00291 1037 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 CST5P28325 142 aaPredicted RBP22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 CNTN2Q02246 1040 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 TRIM60Q495X7 471 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 CCSAPQ6IQ19 270 aaPredicted RBP22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 MFSD6Q6ZSS7 791 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 ARMCX2Q7L311 632 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 RASGRP2Q7LDG7 609 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 TRERF1Q96PN7 1200 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 KATNBL1Q9H079 304 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 RANBP17Q9H2T7 1088 aaKnown RBP22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 RNF41Q9H4P4 317 aaPredicted RBP22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 TOMM22Q9NS69 142 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 ZHX1Q9UKY1 873 aaPredicted RBP22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 SYNRGQ9UMZ2 1314 aa22.21■■□□□ 1.15
NDUFS3-213ENST00000534716 A0A1W2PQ45 241 aaPredicted RBP22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 A0A1W2PQY0 241 aa22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 MOXD2PA6NHM9 499 aa22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 ICAM1P05362 532 aa22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 HAND2P61296 217 aa22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 RRP12Q5JTH9 1297 aaKnown RBP22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 CCDC144CPQ8IYA2 1237 aa22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 LENG1Q96BZ8 264 aaPredicted RBP22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 PDLIM7Q9NR12 457 aa22.2■■□□□ 1.14
NDUFS3-213ENST00000534716 NKX3-2P78367 333 aa22.19■■□□□ 1.14
NDUFS3-213ENST00000534716 CCDC96Q2M329 555 aa22.19■■□□□ 1.14
NDUFS3-213ENST00000534716 TBC1D10CQ8IV04 446 aa22.19■■□□□ 1.14
NDUFS3-213ENST00000534716 UPF3AQ9H1J1 476 aaKnown RBP22.19■■□□□ 1.14
NDUFS3-213ENST00000534716 LAMA2P24043 3122 aaKnown RBP22.19■■□□□ 1.14
NDUFS3-213ENST00000534716 SOWAHBA6NEL2 793 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 ASB14A6NK59 587 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 SNHG28P0DPA3 235 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 ALAS1P13196 640 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 ACLYP53396 1101 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 GJA9P57773 515 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 CCDC144BQ3MJ40 725 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 CCDC174Q6PII3 467 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 NUP133Q8WUM0 1156 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 ESR2Q92731 530 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 CHMP4CQ96CF2 233 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 CYP39A1Q9NYL5 469 aa22.18■■□□□ 1.14
NDUFS3-213ENST00000534716 TRIM43BA6NCK2 446 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 ZNF213O14771 459 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 ADCY6O43306 1168 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 PDHBP11177 359 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 SNAP25P60880 206 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 TLE2Q04725 743 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 KCNA10Q16322 511 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 SYDE2Q5VT97 1194 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 TTBK2Q6IQ55 1244 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 CWC27Q6UX04 472 aaKnown RBP22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 ANKRD33Q7Z3H0 272 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 TRIM43Q96BQ3 446 aaPredicted RBP22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 TOX2Q96NM4 488 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 DSCC1Q9BVC3 393 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 DIAPH3Q9NSV4 1193 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 CCPG1Q9ULG6 757 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 SMCHD1A6NHR9 2005 aa22.17■■□□□ 1.14
NDUFS3-213ENST00000534716 ASTN1O14525 1302 aa22.16■■□□□ 1.14
NDUFS3-213ENST00000534716 ELP1O95163 1332 aa22.16■■□□□ 1.14
NDUFS3-213ENST00000534716 MUM1L1Q5H9M0 696 aa22.16■■□□□ 1.14
NDUFS3-213ENST00000534716 DGKHQ86XP1 1220 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms