RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 RASA1P20936 1047 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 BTDP43251 543 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 CRKP46108 304 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 EIF6P56537 245 aaKnown RBP7.29□□□□□ -1.24
CMTM1-220ENST00000534143 ANAPC15P60006 121 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 MAP3K10Q02779 954 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 APOBEC3HQ6NTF7 200 aaKnown RBP7.29□□□□□ -1.24
CMTM1-220ENST00000534143 GIMAP6Q6P9H5 292 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 CERS3Q8IU89 383 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 TEKT1Q969V4 418 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 ACDQ96AP0 544 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 IPO9Q96P70 1041 aaKnown RBP7.29□□□□□ -1.24
CMTM1-220ENST00000534143 ZIC5Q96T25 663 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 EPB41L4AQ9HCS5 686 aaPredicted RBP7.29□□□□□ -1.24
CMTM1-220ENST00000534143 SERPINA10Q9UK55 444 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 SNX14Q9Y5W7 946 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 SLC4A4Q9Y6R1 1079 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 LAMA4Q16363 1823 aa7.29□□□□□ -1.24
CMTM1-220ENST00000534143 ZMYM6O95789 1325 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 ZNF541Q9H0D2 1346 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 CYP21A2P08686 494 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 BCRP11274 1271 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 MCCP23508 829 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 RPS12P25398 132 aaKnown RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 TXLNAP40222 546 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 MMP14P50281 582 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 ZNF280AP59817 542 aaPredicted RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 TBCELQ5QJ74 424 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 SH3RF3Q8TEJ3 882 aaPredicted RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 SDR42E1Q8WUS8 393 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 DPF2Q92785 391 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 ABHD17AQ96GS6 310 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 ZBED3Q96IU2 234 aaPredicted RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 PRMT6Q96LA8 375 aaPredicted RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 NOL10Q9BSC4 688 aaKnown RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 CRNKL1Q9BZJ0 848 aaKnown RBP7.28□□□□□ -1.24
CMTM1-220ENST00000534143 ENAMQ9NRM1 1142 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 ATP8A2Q9NTI2 1148 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 RNF181Q9P0P0 153 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 CTNNA3Q9UI47 895 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 HDAC9Q9UKV0 1011 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 PCDHGC4Q9Y5F7 938 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 PCDHAC2Q9Y5I4 1007 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 TAF6LQ9Y6J9 622 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 MYH1P12882 1939 aa7.28□□□□□ -1.24
CMTM1-220ENST00000534143 SHTN1A0MZ66 631 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 SERTM1A2A2V5 107 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 SFI1A8K8P3 1242 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 EML1O00423 815 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 FGFR3P22607 806 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 LMOD1P29536 600 aaPredicted RBP7.27□□□□□ -1.25
CMTM1-220ENST00000534143 GMPSP49915 693 aaPredicted RBP7.27□□□□□ -1.25
CMTM1-220ENST00000534143 CFAP100Q494V2 611 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 SBK1Q52WX2 424 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 C9orf131Q5VYM1 1079 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 CDC42EP5Q6NZY7 148 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 KLRG1Q96E93 195 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 TM6SF1Q9BZW5 370 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 TSPAN10Q9H1Z9 355 aaPredicted RBP7.27□□□□□ -1.25
CMTM1-220ENST00000534143 DCP1AQ9NPI6 582 aaPredicted RBP7.27□□□□□ -1.25
CMTM1-220ENST00000534143 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 ANAPC4Q9UJX5 808 aa7.27□□□□□ -1.25
CMTM1-220ENST00000534143 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
CMTM1-220ENST00000534143 NAV1Q8NEY1 1877 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 LAMB1P07942 1786 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L12C9JPN9 530 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L21D6R901 530 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 ZNF213O14771 459 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 ATXN7O15265 892 aaPredicted RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 WDHD1O75717 1129 aaPredicted RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 APPP05067 770 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 ZKSCAN1P17029 563 aaPredicted RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 HSPA6P17066 643 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 USP5P45974 858 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 SEC13P55735 322 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 PSMA6P60900 246 aaKnown RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 CTBSQ01459 385 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 PTK7Q13308 1070 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 IMMTQ16891 758 aaKnown RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 ADCK5Q3MIX3 580 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 CTR9Q6PD62 1173 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 STOX1Q6ZVD7 989 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 TEX11Q8IYF3 940 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 GPC2Q8N158 579 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 TSEN2Q8NCE0 465 aaKnown RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 TGFBRAP1Q8WUH2 860 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 IDI2Q9BXS1 227 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 NACAP1Q9BZK3 213 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 NAPBQ9H115 298 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 TDRD3Q9H7E2 651 aaKnown RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 VRTNQ9H8Y1 702 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 NMRK2Q9NPI5 230 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 DDX4Q9NQI0 724 aaKnown RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 CNOT7Q9UIV1 285 aaKnown RBP7.26□□□□□ -1.25
CMTM1-220ENST00000534143 ZNF232Q9UNY5 417 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 TACC3Q9Y6A5 838 aa7.26□□□□□ -1.25
CMTM1-220ENST00000534143 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms