RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 TEX13BQ9BXU2 312 aa20.09■□□□□ 0.81
CTSB-229ENST00000533572 AGXT2Q9BYV1 514 aa20.09■□□□□ 0.81
CTSB-229ENST00000533572 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.09■□□□□ 0.812e-6■■■□□ 16.2
CTSB-229ENST00000533572 PDRG1Q9NUG6 133 aa20.09■□□□□ 0.81
CTSB-229ENST00000533572 PDE4DIPQ5VU43 2346 aa20.09■□□□□ 0.81
CTSB-229ENST00000533572 RPTORQ8N122 1335 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 CCDC69A6NI79 296 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 FDX1P10109 184 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 PRKAR2AP13861 404 aaKnown RBP20.08■□□□□ 0.81
CTSB-229ENST00000533572 SLC4A3P48751 1232 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 NEK4P51957 841 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 SNRNP48Q6IEG0 339 aaKnown RBP20.08■□□□□ 0.81
CTSB-229ENST00000533572 RCSD1Q6JBY9 416 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 SYNE3Q6ZMZ3 975 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 CHST3Q7LGC8 479 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 SGMS1Q86VZ5 419 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 U2AF1L4Q8WU68 220 aaKnown RBP20.08■□□□□ 0.81
CTSB-229ENST00000533572 DCAF4Q8WV16 495 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 DEFB118Q96PH6 123 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 TMEM47Q9BQJ4 181 aa20.08■□□□□ 0.81
CTSB-229ENST00000533572 UPF3BQ9BZI7 483 aaKnown RBP20.08■□□□□ 0.81
CTSB-229ENST00000533572 ZNF214Q9UL59 606 aaPredicted RBP20.08■□□□□ 0.81
CTSB-229ENST00000533572 COL11A1P12107 1806 aaPredicted RBP20.07■□□□□ 0.8
CTSB-229ENST00000533572 ST18O60284 1047 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 CAPN2P17655 700 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 KCTD2Q14681 263 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 CCL14Q16627 93 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 NFXL1Q6ZNB6 911 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 Q6ZUG5 572 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 ABRAQ8N0Z2 381 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 MMP19Q99542 508 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 KIF2CQ99661 725 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 LY9Q9HBG7 655 aa20.07■□□□□ 0.8
CTSB-229ENST00000533572 SGPL1O95470 568 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 TFRCP02786 760 aaKnown RBP20.06■□□□□ 0.8
CTSB-229ENST00000533572 HOXC6P09630 235 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 CALM1P0DP23 149 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 CALM2P0DP24 149 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 CALM3P0DP25 149 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 RCAN1P53805 252 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 TRIM32Q13049 653 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 CATIPQ7Z7H3 387 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 PNMA1Q8ND90 353 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 REPS2Q8NFH8 660 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 SLC38A10Q9HBR0 1119 aa20.06■□□□□ 0.8
CTSB-229ENST00000533572 PAK6Q9NQU5 681 aaPredicted RBP20.06■□□□□ 0.8
CTSB-229ENST00000533572 ZNF236Q9UL36 1845 aa20.05■□□□□ 0.8
CTSB-229ENST00000533572 DDAH1O94760 285 aa20.05■□□□□ 0.8
CTSB-229ENST00000533572 MAP3K14Q99558 947 aa20.05■□□□□ 0.8
CTSB-229ENST00000533572 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
CTSB-229ENST00000533572 SLC12A7Q9Y666 1083 aa20.05■□□□□ 0.8
CTSB-229ENST00000533572 ATP2A1O14983 1001 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 PLA2G6O60733 806 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 CPA1P15085 419 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 MCM2P49736 904 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 OAZ1P54368 228 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 CACNB2Q08289 660 aaPredicted RBP20.04■□□□□ 0.8
CTSB-229ENST00000533572 PPP2R5BQ15173 497 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 NPLOC4Q8TAT6 608 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 SHISA4Q96DD7 197 aa20.04■□□□□ 0.8
CTSB-229ENST00000533572 FARP2O94887 1054 aaPredicted RBP20.03■□□□□ 0.8
CTSB-229ENST00000533572 EVCP57679 992 aa20.03■□□□□ 0.8
CTSB-229ENST00000533572 MAP3K21Q5TCX8 1036 aa20.03■□□□□ 0.8
CTSB-229ENST00000533572 BRF1Q92994 677 aa20.03■□□□□ 0.8
CTSB-229ENST00000533572 TCEANC2Q96MN5 208 aa20.03■□□□□ 0.8
CTSB-229ENST00000533572 LRRC2Q9BYS8 371 aa20.03■□□□□ 0.8
CTSB-229ENST00000533572 FBXO40Q9UH90 709 aa20.03■□□□□ 0.8
CTSB-229ENST00000533572 COBLO75128 1261 aa20.02■□□□□ 0.8
CTSB-229ENST00000533572 GPATCH4Q5T3I0 446 aaKnown RBP20.02■□□□□ 0.8
CTSB-229ENST00000533572 OLFML2BQ68BL8 750 aa20.02■□□□□ 0.8
CTSB-229ENST00000533572 RASGRP2Q7LDG7 609 aa20.02■□□□□ 0.8
CTSB-229ENST00000533572 ZNF654Q8IZM8 581 aa20.02■□□□□ 0.8
CTSB-229ENST00000533572 DDX11Q96FC9 970 aa20.02■□□□□ 0.8
CTSB-229ENST00000533572 ZNF274Q96GC6 653 aaPredicted RBP20.02■□□□□ 0.8
CTSB-229ENST00000533572 FLRT1Q9NZU1 646 aa20.02■□□□□ 0.8
CTSB-229ENST00000533572 FRMPD2Q68DX3 1309 aaPredicted RBP20.02■□□□□ 0.79
CTSB-229ENST00000533572 SNHG28P0DPA3 235 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 CNGA1P29973 690 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 KIF5BP33176 963 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 CYP2C19P33261 490 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 COL9A3Q14050 684 aaPredicted RBP20.01■□□□□ 0.79
CTSB-229ENST00000533572 TOB2Q14106 344 aaPredicted RBP20.01■□□□□ 0.79
CTSB-229ENST00000533572 ASPRV1Q53RT3 343 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 CCDC174Q6PII3 467 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 CHST13Q8NET6 341 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 CTCFLQ8NI51 663 aaPredicted RBP20.01■□□□□ 0.79
CTSB-229ENST00000533572 GPCPD1Q9NPB8 672 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 PRR12Q9ULL5 1215 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 BRCA2P51587 3418 aa20.01■□□□□ 0.79
CTSB-229ENST00000533572 KLF18A0A0U1RQI7 1052 aa20■□□□□ 0.79
CTSB-229ENST00000533572 CCDC196A0A1B0GTZ2 297 aa20■□□□□ 0.79
CTSB-229ENST00000533572 ZBTB43O43298 467 aa20■□□□□ 0.79
CTSB-229ENST00000533572 PGK2P07205 417 aa20■□□□□ 0.79
CTSB-229ENST00000533572 PDHBP11177 359 aa20■□□□□ 0.79
CTSB-229ENST00000533572 CCND3P30281 292 aaPredicted RBP20■□□□□ 0.79
CTSB-229ENST00000533572 GNAQP50148 359 aa20■□□□□ 0.79
CTSB-229ENST00000533572 AK2P54819 239 aa20■□□□□ 0.79
CTSB-229ENST00000533572 TROAPQ12815 778 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms