RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 OTUD7BQ6GQQ9 843 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 DAGLBQ8NCG7 672 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 ZMYND12Q9H0C1 365 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 SLC38A10Q9HBR0 1119 aa17.04■□□□□ 0.32
NXF1-214ENST00000533048 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
NXF1-214ENST00000533048 CETPP11597 493 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.327e-18■■■□□ 14.8
NXF1-214ENST00000533048 CALML3P27482 149 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 GTF2A2P52657 109 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 GUCY1B3Q02153 619 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 COG2Q14746 738 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 TREML2Q5T2D2 321 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 LBX2Q6XYB7 198 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 RASAL3Q86YV0 1011 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
NXF1-214ENST00000533048 ZSCAN16Q9H4T2 348 aaPredicted RBP17.03■□□□□ 0.32
NXF1-214ENST00000533048 PNMA2Q9UL42 364 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 SLC45A1Q9Y2W3 748 aa17.03■□□□□ 0.32
NXF1-214ENST00000533048 ZNF536O15090 1300 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 TMEM88BA6NKF7 163 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 ICAM1P05362 532 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 DSG3P32926 999 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 FOSBP53539 338 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 RGMBQ6NW40 437 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 BRAPQ7Z569 592 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 REPS2Q8NFH8 660 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.32
NXF1-214ENST00000533048 KCNJ14Q9UNX9 436 aa17.02■□□□□ 0.32
NXF1-214ENST00000533048 TESPA1A2RU30 521 aaPredicted RBP17.01■□□□□ 0.31
NXF1-214ENST00000533048 SPDYE16A6NNV3 312 aaPredicted RBP17.01■□□□□ 0.31
NXF1-214ENST00000533048 M0R2N6 131 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 VWA5AO00534 786 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 ATP2A1O14983 1001 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 SLC10A3P09131 477 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 OAZ1P54368 228 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 NAPAP54920 295 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 PABPC4Q13310 644 aaKnown RBP eCLIP17.01■□□□□ 0.31
NXF1-214ENST00000533048 SAFBQ15424 915 aaKnown RBP eCLIP17.01■□□□□ 0.31
NXF1-214ENST00000533048 GADL1Q6ZQY3 521 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 DIS3L2Q8IYB7 885 aaKnown RBP17.01■□□□□ 0.31
NXF1-214ENST00000533048 TNFRSF25Q93038 417 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 HOXC10Q9NYD6 342 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 PCDHA4Q9UN74 947 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 PCDHA1Q9Y5I3 950 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 ATP6V1DQ9Y5K8 247 aa17.01■□□□□ 0.31
NXF1-214ENST00000533048 RBBP6Q7Z6E9 1792 aaKnown RBP17■□□□□ 0.31
NXF1-214ENST00000533048 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
NXF1-214ENST00000533048 KIF28PB7ZC32 967 aa17■□□□□ 0.31
NXF1-214ENST00000533048 KRT2P35908 639 aa17■□□□□ 0.31
NXF1-214ENST00000533048 ZNF157P51786 506 aaPredicted RBP17■□□□□ 0.31
NXF1-214ENST00000533048 NLRP5P59047 1200 aa17■□□□□ 0.31
NXF1-214ENST00000533048 FERMT3Q86UX7 667 aa17■□□□□ 0.31
NXF1-214ENST00000533048 MB21D1Q8N884 522 aa17■□□□□ 0.31
NXF1-214ENST00000533048 BRI3BPQ8WY22 251 aa17■□□□□ 0.31
NXF1-214ENST00000533048 COA7Q96BR5 231 aa17■□□□□ 0.31
NXF1-214ENST00000533048 ATG4CQ96DT6 458 aa17■□□□□ 0.31
NXF1-214ENST00000533048 GLT8D2Q9H1C3 349 aa17■□□□□ 0.31
NXF1-214ENST00000533048 BRMS1Q9HCU9 246 aa17■□□□□ 0.31
NXF1-214ENST00000533048 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
NXF1-214ENST00000533048 CCL15-CCL14A0A0B4J2E2 113 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 BTBD18B2RXH4 712 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 ZBED4O75132 1171 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 GNA11P29992 359 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 SNAP25P60880 206 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 CCL15Q16663 113 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 ANKRD23Q86SG2 305 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 OXER1Q8TDS5 423 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 ASCC2Q9H1I8 757 aaPredicted RBP16.99■□□□□ 0.31
NXF1-214ENST00000533048 C6orf50Q9HD87 102 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 RIC8AQ9NPQ8 531 aa16.99■□□□□ 0.31
NXF1-214ENST00000533048 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
NXF1-214ENST00000533048 ABCB11O95342 1321 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
NXF1-214ENST00000533048 OPLAHO14841 1288 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 ADCY7P51828 1080 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 IRX3P78415 501 aaPredicted RBP16.98■□□□□ 0.31
NXF1-214ENST00000533048 GHRHRQ02643 423 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 BLIDQ8IZY5 108 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 BICD2Q8TD16 824 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 CCDC102AQ96A19 550 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 ZCCHC17Q9NP64 241 aaKnown RBP16.98■□□□□ 0.31
NXF1-214ENST00000533048 PNMA3Q9UL41 463 aa16.98■□□□□ 0.31
NXF1-214ENST00000533048 MANSC4A6NHS7 340 aaPredicted RBP16.97■□□□□ 0.31
NXF1-214ENST00000533048 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 CLK2P49760 499 aaKnown RBP16.97■□□□□ 0.31
NXF1-214ENST00000533048 HERVK_113P62684 666 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 NR5A1Q13285 461 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 FOXD4L5Q5VV16 416 aaPredicted RBP16.97■□□□□ 0.31
NXF1-214ENST00000533048 ATL3Q6DD88 541 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms