RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
CHMP4A-206ENST00000533011 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 TLL1O43897 1013 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 PRDM1O75626 825 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 HSPD1P10809 573 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 EEF2P13639 858 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 FOXK2Q01167 660 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 CWC27Q6UX04 472 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 ABRAQ8N0Z2 381 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 RPAP3Q9H6T3 665 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 HOXC10Q9NYD6 342 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-206ENST00000533011 XIRP2A4UGR9 3374 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 MOXD2PA6NHM9 499 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 FGAP02671 866 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 ADORA2AP29274 412 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 KCNQ1P51787 676 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 TFF2Q03403 129 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 C11orf16Q9NQ32 467 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 TCF20Q9UGU0 1960 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 ZMYM6O95789 1325 aa12.06□□□□□ -0.48
CHMP4A-206ENST00000533011 A0A1W2PQ45 241 aaPredicted RBP12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 A0A1W2PQY0 241 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 GRXCR1A8MXD5 290 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 TSPY3P0CV98 308 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 TSPY8P0CW00 308 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 COG2Q14746 738 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 ANO1Q5XXA6 986 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 ZNF365Q70YC5 407 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 CENPQQ7L2Z9 268 aaPredicted RBP12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 NEDD1Q8NHV4 660 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 TANGO6Q9C0B7 1094 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 MROH8Q9H579 483 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 GOPCQ9HD26 462 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 STARD7Q9NQZ5 370 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
CHMP4A-206ENST00000533011 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 IGKV6D-41A0A0C4DH26 115 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 FGBP02675 491 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 FGRP09769 529 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 ALADP13716 330 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 TFAP4Q01664 338 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 MB21D1Q8N884 522 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 HLA-CQ95604 372 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 CEP95Q96GE4 821 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 NKX2-4Q9H2Z4 354 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 BTBD7Q9P203 1132 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 CLIP2Q9UDT6 1046 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 PCDHA11Q9Y5I1 949 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 ELP1O95163 1332 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 PLIN4Q96Q06 1357 aa12.04□□□□□ -0.48
CHMP4A-206ENST00000533011 SPDYE16A6NNV3 312 aaPredicted RBP12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 TTLL1O95922 423 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 NHLH1Q02575 133 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 PPP4R3BQ5MIZ7 849 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 MKL1Q969V6 931 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 IL23AQ9NPF7 189 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 SYNPO2Q9UMS6 1093 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 DIS3Q9Y2L1 958 aaKnown RBP12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
CHMP4A-206ENST00000533011 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 F5H6K3 240 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 TLR3O15455 904 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 ORC4O43929 436 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 RAD21O60216 631 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 RANBP6O60518 1105 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 COBLO75128 1261 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 FLOT1O75955 427 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 NEFLP07196 543 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 AKR1A1P14550 325 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 CSF2RAP15509 400 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 DSG3P32926 999 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 CDK7P50613 346 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 ACLYP53396 1101 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 KLRC3Q07444 240 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 CSPP1Q1MSJ5 1256 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 PRAMEF19Q5SWL8 479 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 RUFY2Q8WXA3 655 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 MAML3Q96JK9 1138 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 CCDC136Q96JN2 1154 aa12.02□□□□□ -0.49
CHMP4A-206ENST00000533011 GLT1D1Q96MS3 346 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms