RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PTGDRQ13258 359 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 POSTNQ15063 836 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 CFAP100Q494V2 611 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 DALRD3Q5D0E6 543 aaKnown RBP13.96□□□□□ -0.17
CHD7-211ENST00000532149 RBM26Q5T8P6 1007 aaKnown RBP13.96□□□□□ -0.17
CHD7-211ENST00000532149 DTHD1Q6ZMT9 781 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 PIK3AP1Q6ZUJ8 805 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.17
CHD7-211ENST00000532149 REXO1Q8N1G1 1221 aaKnown RBP13.96□□□□□ -0.17
CHD7-211ENST00000532149 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 SPATA20Q8TB22 786 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 JDP2Q8WYK2 163 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 MTMR8Q96EF0 704 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 GMCL1Q96IK5 515 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 GMLQ99445 158 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 TRIM5Q9C035 493 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 RMND1Q9NWS8 449 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
CHD7-211ENST00000532149 ZNF646O15015 1829 aaPredicted RBP13.96□□□□□ -0.17
CHD7-211ENST00000532149 SMCO2A6NFE2 343 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 POLR2DO15514 142 aaKnown RBP13.95□□□□□ -0.18
CHD7-211ENST00000532149 NRDCO43847 1150 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
CHD7-211ENST00000532149 MDM2Q00987 491 aaPredicted RBP13.95□□□□□ -0.18
CHD7-211ENST00000532149 TNFAIP1Q13829 316 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 PLA2G4DQ86XP0 818 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 RNF25Q96BH1 459 aaPredicted RBP13.95□□□□□ -0.18
CHD7-211ENST00000532149 HOOK2Q96ED9 719 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
CHD7-211ENST00000532149 CCSER1Q9C0I3 900 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 FAM198AQ9UFP1 575 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 PCDHA6Q9UN73 950 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 PCDHA8Q9Y5H6 950 aa13.95□□□□□ -0.18
CHD7-211ENST00000532149 ZBTB5O15062 677 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 PLA2G6O60733 806 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 DPEP1P16444 411 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 KCNA3P22001 575 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 SARSP49591 514 aaKnown RBP13.94□□□□□ -0.18
CHD7-211ENST00000532149 ADCY7P51828 1080 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 GSDMDP57764 484 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 LONRF3Q496Y0 759 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 USP17L2Q6R6M4 530 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 NEK8Q86SG6 692 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 LUZP1Q86V48 1076 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 CUL5Q93034 780 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
CHD7-211ENST00000532149 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 ARHGEF10LQ9HCE6 1279 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 RIC8AQ9NPQ8 531 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 SCN9AQ15858 1988 aa13.94□□□□□ -0.18
CHD7-211ENST00000532149 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
CHD7-211ENST00000532149 FOSP01100 380 aaPredicted RBP13.93□□□□□ -0.18
CHD7-211ENST00000532149 ZNF75DP51815 510 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 AMPD3Q01432 767 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 MYL5Q02045 173 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 PDIA5Q14554 519 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 PPP4R3AQ6IN85 833 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 MOXD1Q6UVY6 613 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 SLC51AQ86UW1 340 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 CLIC6Q96NY7 704 aa13.93□□□□□ -0.18
CHD7-211ENST00000532149 MYH4Q9Y623 1939 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 YDJCA8MPS7 323 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 ACTN4O43707 911 aaKnown RBP13.92□□□□□ -0.18
CHD7-211ENST00000532149 UBA7P41226 1012 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 SLC1A4P43007 532 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 MAP3K10Q02779 954 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 ICA1Q05084 483 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 NFIAQ12857 509 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 AP3B2Q13367 1082 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 ZNF174Q15697 407 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 SLC4A8Q2Y0W8 1093 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 BTNL9Q6UXG8 535 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 CSRNP1Q96S65 589 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 GOPCQ9HD26 462 aa13.92□□□□□ -0.18
CHD7-211ENST00000532149 PRKCSHP14314 528 aaPredicted RBP13.91□□□□□ -0.18
CHD7-211ENST00000532149 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 USP11P51784 963 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 SLFN13Q68D06 897 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 CIAPIN1Q6FI81 312 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 DHX40Q8IX18 779 aaKnown RBP13.91□□□□□ -0.18
CHD7-211ENST00000532149 DRC7Q8IY82 874 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 C4orf32Q8N8J7 132 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
CHD7-211ENST00000532149 DPF2Q92785 391 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 SYMPKQ92797 1274 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms