RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 NDFIP2Q9NV92 336 aa5.41□□□□□ -1.54
AC055878.1-201ENST00000531858 WHRNQ9P202 907 aa5.41□□□□□ -1.54
AC055878.1-201ENST00000531858 H3BRJ5 948 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 PRKD3O94806 890 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 BCRP11274 1271 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 EIF2AK2P19525 551 aaKnown RBP5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 DDIT3P35638 169 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 LSSP48449 732 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 CDK8P49336 464 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 ARL4DP49703 201 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 NEK3P51956 506 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 UBAP2LQ14157 1087 aaKnown RBP5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 GAS6Q14393 721 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 ZNF460Q14592 562 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 FGD2Q7Z6J4 655 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 TPH2Q8IWU9 490 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 CBARPQ8N350 705 aaPredicted RBP5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 ANKRD42Q8N9B4 389 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 COG1Q8WTW3 980 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 SCLYQ96I15 445 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 MRGPRX3Q96LB0 322 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 SLC6A18Q96N87 628 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 SLC30A3Q99726 388 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 CORO1BQ9BR76 489 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 PAGR1Q9BTK6 254 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 WNT10AQ9GZT5 417 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 NGRNQ9NPE2 291 aaKnown RBP5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 NLRC4Q9NPP4 1024 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 MBIPQ9NS73 344 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 KLHL11Q9NVR0 708 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 FRRS1LQ9P0K9 344 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 KLHL3Q9UH77 587 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 ATXN7L1Q9ULK2 861 aaPredicted RBP5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 DAAM1Q9Y4D1 1078 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 MRFAP1Q9Y605 127 aa5.4□□□□□ -1.54
AC055878.1-201ENST00000531858 BTBD11A6QL63 1104 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 CHURC1-FNTBB4DL54 471 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 CBFA2T2O43439 604 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 DLX3O60479 287 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 CLEC3AO75596 197 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 CPP00450 1065 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 LTFP02788 710 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 PF4V1P10720 104 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 RBP3P10745 1247 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 LPOP22079 712 aaPredicted RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 PPM1FP49593 454 aaPredicted RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 SESN3P58005 492 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 ERVK-21P61565 698 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 KLF1Q13351 362 aaPredicted RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 KIF4BQ2VIQ3 1234 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 COBLL1Q53SF7 1204 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 ANO1Q5XXA6 986 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 SLC6A19Q695T7 634 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 MPRIPQ6WCQ1 1025 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 EPM2AIP1Q7L775 607 aaPredicted RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 ALYREFQ86V81 257 aaKnown RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 C11orf74Q86VG3 221 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 TRIM59Q8IWR1 403 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 MRPL41Q8IXM3 137 aaKnown RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 SNRNP27Q8WVK2 155 aaKnown RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 ATXN2LQ8WWM7 1075 aaKnown RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 TIFAQ96CG3 184 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 TNIP3Q96KP6 325 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 CCDC74BQ96LY2 380 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 GAS2L1Q99501 681 aaPredicted RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 NUCKS1Q9H1E3 243 aaKnown RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 LRRC4BQ9NT99 713 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 DNAJB12Q9NXW2 375 aaKnown RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 LUZP4Q9P127 313 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 GDF2Q9UK05 429 aaPredicted RBP5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 PHF24Q9UPV7 400 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 EMC9Q9Y3B6 208 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 WASHC2AQ641Q2 1341 aa5.39□□□□□ -1.55
AC055878.1-201ENST00000531858 CFAP69A5D8W1 941 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 SPDYE3A6NKU9 549 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 FZD9O00144 591 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 CBX4O00257 560 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 SOX1O00570 391 aaPredicted RBP5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 FANCGO15287 622 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 GAS7O60861 476 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 SIN3BO75182 1162 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 FKBP9O95302 570 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 SCG5P05408 212 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 MYBL2P10244 700 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 HSPA6P17066 643 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PTMSP20962 102 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 AKAP5P24588 427 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 HOXC12P31275 282 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 GRK4P32298 578 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 CCT5P48643 541 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 AK2P54819 239 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PIP4K2BP78356 416 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 DSG1Q02413 1049 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 RING1Q06587 406 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 CNGB1Q14028 1251 aaPredicted RBP5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 ARHGAP29Q52LW3 1261 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PIK3R6Q5UE93 754 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 CYB5RLQ6IPT4 315 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 STYK1Q6J9G0 422 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms