RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 TACC3Q9Y6A5 838 aa21.17■□□□□ 0.98
PTPN11-204ENST00000531326 SYNRGQ9UMZ2 1314 aa21.17■□□□□ 0.98
PTPN11-204ENST00000531326 PLIN4Q96Q06 1357 aa21.17■□□□□ 0.98
PTPN11-204ENST00000531326 FOXP2O15409 715 aa21.16■□□□□ 0.98
PTPN11-204ENST00000531326 ZBED4O75132 1171 aa21.16■□□□□ 0.98
PTPN11-204ENST00000531326 CLTBP09497 229 aa21.16■□□□□ 0.98
PTPN11-204ENST00000531326 GMCL1P1Q8NEA9 526 aa21.16■□□□□ 0.98
PTPN11-204ENST00000531326 IL25Q9H293 177 aa21.16■□□□□ 0.98
PTPN11-204ENST00000531326 ZNF287Q9HBT7 754 aa21.16■□□□□ 0.98
PTPN11-204ENST00000531326 CDH23Q9H251 3354 aa21.16■□□□□ 0.98
PTPN11-204ENST00000531326 ADCY6O43306 1168 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 TTLL1O95922 423 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 ACLYP53396 1101 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 EPHB4P54760 987 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 IRX5P78411 483 aaPredicted RBP21.15■□□□□ 0.98
PTPN11-204ENST00000531326 ZNF697Q5TEC3 545 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 CCSAPQ6IQ19 270 aaPredicted RBP21.15■□□□□ 0.98
PTPN11-204ENST00000531326 ZNF467Q7Z7K2 595 aaPredicted RBP21.15■□□□□ 0.98
PTPN11-204ENST00000531326 KLHDC9Q8NEP7 349 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 NEDD1Q8NHV4 660 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 TSEN34Q9BSV6 310 aaKnown RBP21.15■□□□□ 0.98
PTPN11-204ENST00000531326 FEM1BQ9UK73 627 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 ZHX1Q9UKY1 873 aaPredicted RBP21.15■□□□□ 0.98
PTPN11-204ENST00000531326 FAM184BQ9ULE4 1060 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 SYNPO2Q9UMS6 1093 aa21.15■□□□□ 0.98
PTPN11-204ENST00000531326 CCDC171Q6TFL3 1326 aa21.14■□□□□ 0.97
PTPN11-204ENST00000531326 MYADML2A6NDP7 307 aa21.14■□□□□ 0.97
PTPN11-204ENST00000531326 KIAA0355O15063 1070 aa21.14■□□□□ 0.97
PTPN11-204ENST00000531326 PQBP1O60828 265 aaKnown RBP21.14■□□□□ 0.97
PTPN11-204ENST00000531326 VPS53Q5VIR6 699 aa21.14■□□□□ 0.97
PTPN11-204ENST00000531326 TSPY3P0CV98 308 aa21.13■□□□□ 0.97
PTPN11-204ENST00000531326 TSPY8P0CW00 308 aa21.13■□□□□ 0.97
PTPN11-204ENST00000531326 ACVR2BQ13705 512 aa21.13■□□□□ 0.97
PTPN11-204ENST00000531326 KCNA10Q16322 511 aa21.13■□□□□ 0.97
PTPN11-204ENST00000531326 SLFN13Q68D06 897 aa21.13■□□□□ 0.97
PTPN11-204ENST00000531326 ANKRD33Q7Z3H0 272 aa21.13■□□□□ 0.97
PTPN11-204ENST00000531326 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.13■□□□□ 0.97
PTPN11-204ENST00000531326 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
PTPN11-204ENST00000531326 CUL9Q8IWT3 2517 aa21.13■□□□□ 0.97
PTPN11-204ENST00000531326 DUSP11O75319 330 aaKnown RBP21.12■□□□□ 0.97
PTPN11-204ENST00000531326 BMP3P12645 472 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 OAZ1P54368 228 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 TFAP4Q01664 338 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 PDE4BQ07343 736 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 PPARAQ07869 468 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 FAAP100Q0VG06 881 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 ANKRD35Q8N283 1001 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 CHST13Q8NET6 341 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 NACAP1Q9BZK3 213 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 NAPBQ9H115 298 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 SEMA6BQ9H3T3 888 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 STARD7Q9NQZ5 370 aa21.12■□□□□ 0.97
PTPN11-204ENST00000531326 PRUNE2Q8WUY3 3088 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 RAD50Q92878 1312 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 MOXD2PA6NHM9 499 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 TMEM232C9JQI7 657 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 RAG1P15918 1043 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 SMAD3P84022 425 aaKnown RBP21.11■□□□□ 0.97
PTPN11-204ENST00000531326 ARMCX2Q7L311 632 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 NUP133Q8WUM0 1156 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 TOX2Q96NM4 488 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 CDX2Q99626 313 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-204ENST00000531326 KATNBL1Q9H079 304 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 TTYH1Q9H313 450 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-204ENST00000531326 HOMER2Q9NSB8 354 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 TMEM39AQ9NV64 488 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 FBXO40Q9UH90 709 aa21.11■□□□□ 0.97
PTPN11-204ENST00000531326 ZNF536O15090 1300 aa21.1■□□□□ 0.97
PTPN11-204ENST00000531326 HSPD1P10809 573 aaKnown RBP21.1■□□□□ 0.97
PTPN11-204ENST00000531326 CST5P28325 142 aaPredicted RBP21.1■□□□□ 0.97
PTPN11-204ENST00000531326 CNTN2Q02246 1040 aa21.1■□□□□ 0.97
PTPN11-204ENST00000531326 CCDC144BQ3MJ40 725 aa21.1■□□□□ 0.97
PTPN11-204ENST00000531326 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
PTPN11-204ENST00000531326 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
PTPN11-204ENST00000531326 ABHD16BQ9H3Z7 469 aa21.1■□□□□ 0.97
PTPN11-204ENST00000531326 INCENPQ9NQS7 918 aa21.1■□□□□ 0.97
PTPN11-204ENST00000531326 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTPN11-204ENST00000531326 SGSM2O43147 1006 aa21.09■□□□□ 0.97
PTPN11-204ENST00000531326 CDC45O75419 566 aa21.09■□□□□ 0.97
PTPN11-204ENST00000531326 C6orf222P0C671 652 aaPredicted RBP21.09■□□□□ 0.97
PTPN11-204ENST00000531326 STAT2P52630 851 aa21.09■□□□□ 0.97
PTPN11-204ENST00000531326 MFAP1P55081 439 aaKnown RBP21.09■□□□□ 0.97
PTPN11-204ENST00000531326 CCDC144CPQ8IYA2 1237 aa21.09■□□□□ 0.97
PTPN11-204ENST00000531326 GMCL1Q96IK5 515 aa21.09■□□□□ 0.97
PTPN11-204ENST00000531326 AGBL1Q96MI9 1066 aa21.09■□□□□ 0.97
PTPN11-204ENST00000531326 UPF3AQ9H1J1 476 aaKnown RBP21.09■□□□□ 0.97
PTPN11-204ENST00000531326 DCDC2CA8MYV0 355 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 ASGR1P07306 291 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 SLC3A2P08195 630 aaKnown RBP21.08■□□□□ 0.97
PTPN11-204ENST00000531326 FDX1P10109 184 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 MCCP23508 829 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 GJA9P57773 515 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 FPGSQ05932 587 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 ALX1Q15699 326 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 RASGRP2Q7LDG7 609 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.08■□□□□ 0.97
PTPN11-204ENST00000531326 FAM133AQ8N9E0 248 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 STAG1Q8WVM7 1258 aa21.08■□□□□ 0.97
PTPN11-204ENST00000531326 RNPC3Q96LT9 517 aaKnown RBP21.08■□□□□ 0.97
PTPN11-204ENST00000531326 IL17RBQ9NRM6 502 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms