RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
CHMP4A-205ENST00000531158 CACNA1AO00555 2505 aa11.04□□□□□ -0.64
CHMP4A-205ENST00000531158 PRRC2BQ5JSZ5 2229 aaKnown RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 MOXD2PA6NHM9 499 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 ATP2A1O14983 1001 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 SMARCA5O60264 1052 aaPredicted RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 ASGR1P07306 291 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 BMP1P13497 986 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 CSF2RAP15509 400 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 CCDC144BQ3MJ40 725 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 TMEM240Q5SV17 173 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 MFSD5Q6N075 450 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 MSL3Q8N5Y2 521 aaKnown RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 PBX4Q9BYU1 374 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 UPF3AQ9H1J1 476 aaKnown RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 BRWD1Q9NSI6 2320 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 ASTN1O14525 1302 aa11.03□□□□□ -0.64
CHMP4A-205ENST00000531158 FAM86C2PA6NEL3 165 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 RAB11FIP3O75154 756 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 DUSP11O75319 330 aaKnown RBP11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 COPB2P35606 906 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 GJA9P57773 515 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 ACVR2BQ13705 512 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 ZNF467Q7Z7K2 595 aaPredicted RBP11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 OSBP2Q969R2 916 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 TIFAQ96CG3 184 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 VWCEQ96DN2 955 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 TSPYL2Q9H2G4 693 aaPredicted RBP11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 SLC38A10Q9HBR0 1119 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 RAVER2Q9HCJ3 691 aaKnown RBP11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 CXXC1Q9P0U4 656 aaPredicted RBP11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 NYAP2Q9P242 653 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 TRIP12Q14669 1992 aaPredicted RBP11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 SCN10AQ9Y5Y9 1956 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 ZNF536O15090 1300 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 ELP1O95163 1332 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 UMODL1Q5DID0 1318 aa11.02□□□□□ -0.65
CHMP4A-205ENST00000531158 COL4A4P53420 1690 aaPredicted RBP11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 DCDC2CA8MYV0 355 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 GPR37L1O60883 481 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 PRDM1O75626 825 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 CD4P01730 458 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 C6orf222P0C671 652 aaPredicted RBP11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 ACRP10323 421 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 IGFBP4P22692 258 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 NKX3-2P78367 333 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 BEX3Q00994 111 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 CNTN2Q02246 1040 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 TMEM63BQ5T3F8 832 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 TSHZ3Q63HK5 1081 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 ARMCX2Q7L311 632 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 CCDC144CPQ8IYA2 1237 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 PRPF38AQ8NAV1 312 aaKnown RBP11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 NUP133Q8WUM0 1156 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 DDX11Q96FC9 970 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 PPP1R12CQ9BZL4 782 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 PRDM12Q9H4Q4 367 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 DDX19BQ9UMR2 479 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 GRIN2DO15399 1336 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 PLIN4Q96Q06 1357 aa11.01□□□□□ -0.65
CHMP4A-205ENST00000531158 MUC6Q6W4X9 2439 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 M0R2C6 588 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 ARVCFO00192 962 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 HMMRO75330 724 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 ZNF365Q70YC5 407 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 AMOTL1Q8IY63 956 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 FAM133AQ8N9E0 248 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 SLC43A3Q8NBI5 491 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 MKL1Q969V6 931 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 GLT1D1Q96MS3 346 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 ABHD16BQ9H3Z7 469 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 CLIP2Q9UDT6 1046 aa11□□□□□ -0.65
CHMP4A-205ENST00000531158 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 MINDY4BA8MYZ0 360 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 CYP2C18P33260 490 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 TFF2Q03403 129 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 GNASQ5JWF2 1037 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 CXCL17Q6UXB2 119 aa10.99□□□□□ -0.65
CHMP4A-205ENST00000531158 ANKRD35Q8N283 1001 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms