RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 GUCY1A2P33402 732 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 CDK7P50613 346 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 COG2Q14746 738 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 KCNA10Q16322 511 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 CCDC184Q52MB2 194 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 KRT40Q6A162 431 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 POTEBQ6S5H4 581 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 OTOP2Q7RTS6 562 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 MMP19Q99542 508 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 SERPINB13Q9UIV8 391 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 CNPY2Q9Y2B0 182 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.07□□□□□ -0.8
CD44-232ENST00000531118 SIP14410 1827 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 ZBBXA8MT70 800 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 ARVCFO00192 962 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 ARHGAP33O14559 1287 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 ASGR1P07306 291 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 CA3P07451 260 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 SHMT1P34896 483 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 ZNF792Q3KQV3 632 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 CERKLQ49MI3 558 aaPredicted RBP10.06□□□□□ -0.8
CD44-232ENST00000531118 HLA-CQ95604 372 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 HIPK3Q9H422 1215 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 CABP5Q9NP86 173 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 HOXC10Q9NYD6 342 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 ZHX1Q9UKY1 873 aaPredicted RBP10.06□□□□□ -0.8
CD44-232ENST00000531118 SLC4A7Q9Y6M7 1214 aa10.06□□□□□ -0.8
CD44-232ENST00000531118 A0A1W2PRG0 241 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 FLOT1O75955 427 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 SLC25A27O95847 323 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 CD4P01730 458 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 C6orf222P0C671 652 aaPredicted RBP10.05□□□□□ -0.8
CD44-232ENST00000531118 ATP2A2P16615 1042 aaKnown RBP10.05□□□□□ -0.8
CD44-232ENST00000531118 DYNLL1P63167 89 aaKnown RBP10.05□□□□□ -0.8
CD44-232ENST00000531118 SEPT2Q15019 361 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 GORABQ5T7V8 394 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 GPIHBP1Q8IV16 184 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 FBXL18Q96ME1 805 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 NEUROD6Q96NK8 337 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 UIMC1Q96RL1 719 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 UPF3AQ9H1J1 476 aaKnown RBP10.05□□□□□ -0.8
CD44-232ENST00000531118 WNT8AQ9H1J5 351 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 KCNH6Q9H252 994 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 CERS4Q9HA82 394 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 FAM184BQ9ULE4 1060 aa10.05□□□□□ -0.8
CD44-232ENST00000531118 DIS3Q9Y2L1 958 aaKnown RBP10.05□□□□□ -0.8
CD44-232ENST00000531118 CACNA1HO95180 2353 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 WDFY4Q6ZS81 3184 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 ADCY6O43306 1168 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 DUSP11O75319 330 aaKnown RBP10.04□□□□□ -0.8
CD44-232ENST00000531118 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 UQCRFS1P1P0C7P4 283 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 CCL23P55773 120 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 KCTD2Q14681 263 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 TMEM132BQ14DG7 1078 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
CD44-232ENST00000531118 KIAA1755Q5JYT7 1200 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 PCSK9Q8NBP7 692 aaKnown RBP10.04□□□□□ -0.8
CD44-232ENST00000531118 KCNK17Q96T54 332 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 NOC4LQ9BVI4 516 aaKnown RBP10.04□□□□□ -0.8
CD44-232ENST00000531118 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 TET1Q8NFU7 2136 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 SPTBN4Q9H254 2564 aa10.04□□□□□ -0.8
CD44-232ENST00000531118 USP5P45974 858 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 GRB10Q13322 594 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 TMEM67Q5HYA8 995 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 RIOX2Q8IUF8 465 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 MSL3Q8N5Y2 521 aaKnown RBP10.03□□□□□ -0.8
CD44-232ENST00000531118 ARNTL2Q8WYA1 636 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 SSH1Q8WYL5 1049 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
CD44-232ENST00000531118 GREB1LQ9C091 1923 aaPredicted RBP10.03□□□□□ -0.8
CD44-232ENST00000531118 BAZ2AQ9UIF9 1905 aaKnown RBP10.03□□□□□ -0.8
CD44-232ENST00000531118 TECTAO75443 2155 aa10.02□□□□□ -0.8
CD44-232ENST00000531118 SNAI1O95863 264 aaPredicted RBP10.02□□□□□ -0.81
CD44-232ENST00000531118 CYP2E1P05181 493 aaPredicted RBP10.02□□□□□ -0.81
CD44-232ENST00000531118 COPB2P35606 906 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 GJA9P57773 515 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 TTLL4Q14679 1199 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 TTC6Q86TZ1 520 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 CLEC10AQ8IUN9 316 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 FAM178BQ8IXR5 827 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 SPICE1Q8N0Z3 855 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 GJD3Q8N144 294 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 MIGA1Q8NAN2 632 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 VTI1AQ96AJ9 217 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 CDHR5Q9HBB8 845 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 SPC25Q9HBM1 224 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 KMT2EQ8IZD2 1858 aa10.02□□□□□ -0.81
CD44-232ENST00000531118 USP34Q70CQ2 3546 aa10.01□□□□□ -0.81
CD44-232ENST00000531118 MPHOSPH10O00566 681 aaKnown RBP10.01□□□□□ -0.81
CD44-232ENST00000531118 WDR46O15213 610 aaKnown RBP10.01□□□□□ -0.81
CD44-232ENST00000531118 CTAGE5O15320 804 aa10.01□□□□□ -0.81
CD44-232ENST00000531118 SRGAP3O43295 1099 aa10.01□□□□□ -0.81
CD44-232ENST00000531118 LPXNO60711 386 aa10.01□□□□□ -0.81
CD44-232ENST00000531118 PFKMP08237 780 aa10.01□□□□□ -0.81
CD44-232ENST00000531118 ALADP13716 330 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms