RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 AGBL1Q96MI9 1066 aa22.3■■□□□ 1.16
UBXN1-211ENST00000531056 LSG1Q9H089 658 aaKnown RBP22.3■■□□□ 1.16
UBXN1-211ENST00000531056 RANBP17Q9H2T7 1088 aaKnown RBP22.3■■□□□ 1.16
UBXN1-211ENST00000531056 GPCPD1Q9NPB8 672 aa22.3■■□□□ 1.16
UBXN1-211ENST00000531056 FBXO40Q9UH90 709 aa22.3■■□□□ 1.16
UBXN1-211ENST00000531056 ALPK3Q96L96 1907 aa22.29■■□□□ 1.16
UBXN1-211ENST00000531056 SYDE2Q5VT97 1194 aa22.29■■□□□ 1.16
UBXN1-211ENST00000531056 CCDC174Q6PII3 467 aa22.29■■□□□ 1.16
UBXN1-211ENST00000531056 PNMA1Q8ND90 353 aa22.29■■□□□ 1.16
UBXN1-211ENST00000531056 RBM8AQ9Y5S9 174 aaKnown RBP22.29■■□□□ 1.16
UBXN1-211ENST00000531056 SEC23AQ15436 765 aa22.28■■□□□ 1.16
UBXN1-211ENST00000531056 TKFCQ3LXA3 575 aa22.28■■□□□ 1.16
UBXN1-211ENST00000531056 STOX1Q6ZVD7 989 aa22.28■■□□□ 1.16
UBXN1-211ENST00000531056 ACAD9Q9H845 621 aa22.28■■□□□ 1.16
UBXN1-211ENST00000531056 KAT14Q9H8E8 782 aa22.28■■□□□ 1.16
UBXN1-211ENST00000531056 HOMER2Q9NSB8 354 aa22.28■■□□□ 1.16
UBXN1-211ENST00000531056 DDX20Q9UHI6 824 aaKnown RBP22.28■■□□□ 1.16
UBXN1-211ENST00000531056 SMCHD1A6NHR9 2005 aa22.28■■□□□ 1.16
UBXN1-211ENST00000531056 LCTP09848 1927 aa22.27■■□□□ 1.16
UBXN1-211ENST00000531056 E7EWF7 191 aa22.27■■□□□ 1.16
UBXN1-211ENST00000531056 ICAM1P05362 532 aa22.27■■□□□ 1.16
UBXN1-211ENST00000531056 GPATCH4Q5T3I0 446 aaKnown RBP22.27■■□□□ 1.16
UBXN1-211ENST00000531056 DDX11Q96FC9 970 aa22.27■■□□□ 1.16
UBXN1-211ENST00000531056 PAWRQ96IZ0 340 aaKnown RBP22.27■■□□□ 1.16
UBXN1-211ENST00000531056 TINF2Q9BSI4 451 aa22.27■■□□□ 1.16
UBXN1-211ENST00000531056 UBAC1Q9BSL1 405 aa22.27■■□□□ 1.16
UBXN1-211ENST00000531056 RNF146Q9NTX7 359 aa22.27■■□□□ 1.16
UBXN1-211ENST00000531056 MSCO60682 206 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 CNGA1P29973 690 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 TRDNQ13061 729 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 PRAMEF19Q5SWL8 479 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 ANKRD35Q8N283 1001 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 FGD4Q96M96 766 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 TRERF1Q96PN7 1200 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 NRBP1Q9UHY1 535 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 CCPG1Q9ULG6 757 aa22.26■■□□□ 1.15
UBXN1-211ENST00000531056 ALAS1P13196 640 aa22.25■■□□□ 1.15
UBXN1-211ENST00000531056 TAL1P17542 331 aaPredicted RBP22.25■■□□□ 1.15
UBXN1-211ENST00000531056 MAMDC4Q6UXC1 1216 aa22.25■■□□□ 1.15
UBXN1-211ENST00000531056 KIAA1211Q6ZU35 1233 aa22.25■■□□□ 1.15
UBXN1-211ENST00000531056 NECAB2Q7Z6G3 386 aa22.25■■□□□ 1.15
UBXN1-211ENST00000531056 ZNF467Q7Z7K2 595 aaPredicted RBP22.25■■□□□ 1.15
UBXN1-211ENST00000531056 MSL3Q8N5Y2 521 aaKnown RBP22.25■■□□□ 1.15
UBXN1-211ENST00000531056 HTATIP2Q9BUP3 242 aa22.25■■□□□ 1.15
UBXN1-211ENST00000531056 A1CFQ9NQ94 594 aaKnown RBP22.25■■□□□ 1.15
UBXN1-211ENST00000531056 LRRC37A2A6NM11 1700 aa22.24■■□□□ 1.15
UBXN1-211ENST00000531056 SEPT4O43236 478 aa22.24■■□□□ 1.15
UBXN1-211ENST00000531056 GOLGA8HP0CJ92 632 aa22.24■■□□□ 1.15
UBXN1-211ENST00000531056 MUM1L1Q5H9M0 696 aa22.24■■□□□ 1.15
UBXN1-211ENST00000531056 IFIT1BQ5T764 474 aaKnown RBP22.24■■□□□ 1.15
UBXN1-211ENST00000531056 NCOA7Q8NI08 942 aa22.24■■□□□ 1.15
UBXN1-211ENST00000531056 SYNGAP1Q96PV0 1343 aa22.24■■□□□ 1.15
UBXN1-211ENST00000531056 MCM3APO60318 1980 aa22.23■■□□□ 1.15
UBXN1-211ENST00000531056 ASPRV1Q53RT3 343 aa22.23■■□□□ 1.15
UBXN1-211ENST00000531056 RALYLQ86SE5 291 aaKnown RBP22.23■■□□□ 1.15
UBXN1-211ENST00000531056 MB21D2Q8IYB1 491 aaPredicted RBP22.23■■□□□ 1.15
UBXN1-211ENST00000531056 PFASO15067 1338 aa22.23■■□□□ 1.15
UBXN1-211ENST00000531056 CDC45O75419 566 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 ZNF865P0CJ78 1059 aaPredicted RBP22.22■■□□□ 1.15
UBXN1-211ENST00000531056 COL6A1P12109 1028 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 ANTXR2P58335 489 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 FAM133AQ8N9E0 248 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 CPVLQ9H3G5 476 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 C11orf49Q9H6J7 331 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 ANO2Q9NQ90 1003 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 WDR19Q8NEZ3 1342 aa22.22■■□□□ 1.15
UBXN1-211ENST00000531056 SLC27A2O14975 620 aa22.21■■□□□ 1.15
UBXN1-211ENST00000531056 SNAI1O95863 264 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-211ENST00000531056 CNTN2Q02246 1040 aa22.21■■□□□ 1.15
UBXN1-211ENST00000531056 NECTIN1Q15223 517 aa22.21■■□□□ 1.15
UBXN1-211ENST00000531056 DPF3Q92784 378 aa22.21■■□□□ 1.15
UBXN1-211ENST00000531056 UBA5Q9GZZ9 404 aa22.21■■□□□ 1.15
UBXN1-211ENST00000531056 POTEB2H3BUK9 544 aa22.2■■□□□ 1.14
UBXN1-211ENST00000531056 IFIT3O14879 490 aaKnown RBP22.2■■□□□ 1.14
UBXN1-211ENST00000531056 PARP1P09874 1014 aaKnown RBP22.2■■□□□ 1.14
UBXN1-211ENST00000531056 ANO1Q5XXA6 986 aa22.2■■□□□ 1.14
UBXN1-211ENST00000531056 CREB3L3Q68CJ9 461 aa22.2■■□□□ 1.14
UBXN1-211ENST00000531056 SENP2Q9HC62 589 aa22.2■■□□□ 1.14
UBXN1-211ENST00000531056 CYP39A1Q9NYL5 469 aa22.2■■□□□ 1.14
UBXN1-211ENST00000531056 SOWAHBA6NEL2 793 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 NFIBO00712 420 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 CHST3Q7LGC8 479 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 ADGRF4Q8IZF3 695 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 CLEC4DQ8WXI8 215 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 PNMA2Q9UL42 364 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 CNPY2Q9Y2B0 182 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 ASTN1O14525 1302 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 MYH6P13533 1939 aa22.19■■□□□ 1.14
UBXN1-211ENST00000531056 DNM1LO00429 736 aa22.18■■□□□ 1.14
UBXN1-211ENST00000531056 WTAPQ15007 396 aa22.18■■□□□ 1.14
UBXN1-211ENST00000531056 CDC37Q16543 378 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-211ENST00000531056 CASC1Q6TDU7 716 aa22.18■■□□□ 1.14
UBXN1-211ENST00000531056 ARMCX2Q7L311 632 aa22.18■■□□□ 1.14
UBXN1-211ENST00000531056 STAG2Q8N3U4 1231 aa22.18■■□□□ 1.14
UBXN1-211ENST00000531056 IGDCC4Q8TDY8 1250 aa22.18■■□□□ 1.14
UBXN1-211ENST00000531056 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-211ENST00000531056 MAD2L2Q9UI95 211 aa22.18■■□□□ 1.14
UBXN1-211ENST00000531056 ERICH2A1L162 156 aa22.17■■□□□ 1.14
UBXN1-211ENST00000531056 H0YGN5 161 aa22.17■■□□□ 1.14
UBXN1-211ENST00000531056 AKR1A1P14550 325 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms