RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 CRISPLD2Q9H0B8 497 aa17.52■□□□□ 0.4
PPFIA1-216ENST00000530746 FBXO40Q9UH90 709 aa17.52■□□□□ 0.4
PPFIA1-216ENST00000530746 MYH6P13533 1939 aa17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 TFRCP02786 760 aaKnown RBP17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 PGK2P07205 417 aa17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 CYP2C19P33261 490 aa17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 SEC23AQ15436 765 aa17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 IFIT1BQ5T764 474 aaKnown RBP17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 SYDE2Q5VT97 1194 aa17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 AGBL1Q96MI9 1066 aa17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 DIS3Q9Y2L1 958 aaKnown RBP17.51■□□□□ 0.39
PPFIA1-216ENST00000530746 CCND3P30281 292 aaPredicted RBP17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 SNAP25P60880 206 aa17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 ZNF792Q3KQV3 632 aa17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 TKFCQ3LXA3 575 aa17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 ACAD9Q9H845 621 aa17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
PPFIA1-216ENST00000530746 DNAJC25-GNG10A0A024R161 153 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 SLC27A2O14975 620 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 ICAM1P05362 532 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 ALAS1P13196 640 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 MCM3APO60318 1980 aa17.49■□□□□ 0.39
PPFIA1-216ENST00000530746 ERICH2A1L162 156 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 CYBAP13498 195 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 ASPRV1Q53RT3 343 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 CHST3Q7LGC8 479 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 UBE2Q1Q7Z7E8 422 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 MB21D2Q8IYB1 491 aaPredicted RBP17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 TRPV1Q8NER1 839 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 OGDHLQ9ULD0 1010 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 CCPG1Q9ULG6 757 aa17.48■□□□□ 0.39
PPFIA1-216ENST00000530746 FARP2O94887 1054 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 PARP1P09874 1014 aaKnown RBP17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 ANTXR2P58335 489 aa17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 LHX8Q68G74 356 aa17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 ANKLE1Q8NAG6 615 aa17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 TINF2Q9BSI4 451 aa17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 UBA5Q9GZZ9 404 aa17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 PNMA2Q9UL42 364 aa17.47■□□□□ 0.39
PPFIA1-216ENST00000530746 MSCO60682 206 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 CNGA1P29973 690 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 WTAPQ15007 396 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 ZNF467Q7Z7K2 595 aaPredicted RBP17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 MSL3Q8N5Y2 521 aaKnown RBP17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 IGDCC4Q8TDY8 1250 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 CPVLQ9H3G5 476 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 DDX20Q9UHI6 824 aaKnown RBP17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 NRBP1Q9UHY1 535 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 LCTP09848 1927 aa17.46■□□□□ 0.39
PPFIA1-216ENST00000530746 PFASO15067 1338 aa17.46■□□□□ 0.38
PPFIA1-216ENST00000530746 MCM5P33992 734 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 MUM1L1Q5H9M0 696 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 TMEM67Q5HYA8 995 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 MAMDC4Q6UXC1 1216 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 MTA3Q9BTC8 594 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 SENP2Q9HC62 589 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 WDR19Q8NEZ3 1342 aa17.45■□□□□ 0.38
PPFIA1-216ENST00000530746 SEPT4O43236 478 aa17.44■□□□□ 0.38
PPFIA1-216ENST00000530746 PRC1O43663 620 aa17.44■□□□□ 0.38
PPFIA1-216ENST00000530746 TAL1P17542 331 aaPredicted RBP17.44■□□□□ 0.38
PPFIA1-216ENST00000530746 ADGRF4Q8IZF3 695 aa17.44■□□□□ 0.38
PPFIA1-216ENST00000530746 FAM133AQ8N9E0 248 aa17.44■□□□□ 0.38
PPFIA1-216ENST00000530746 FGD4Q96M96 766 aa17.44■□□□□ 0.38
PPFIA1-216ENST00000530746 SYNGAP1Q96PV0 1343 aa17.44■□□□□ 0.38
PPFIA1-216ENST00000530746 KLRF2D3W0D1 207 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 MNX1P50219 401 aaPredicted RBP17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 TROAPQ12815 778 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 CDC37Q16543 378 aaPredicted RBP17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 NECAB2Q7Z6G3 386 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 STAG2Q8N3U4 1231 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 DIS3LQ8TF46 1054 aaKnown RBP17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 PAWRQ96IZ0 340 aaKnown RBP17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 TMEM87BQ96K49 555 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 LY9Q9HBG7 655 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 CYP39A1Q9NYL5 469 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 MAD2L2Q9UI95 211 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 BAZ2BQ9UIF8 2168 aaKnown RBP17.43■□□□□ 0.38
PPFIA1-216ENST00000530746 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
PPFIA1-216ENST00000530746 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
PPFIA1-216ENST00000530746 SNAI1O95863 264 aaPredicted RBP17.42■□□□□ 0.38
PPFIA1-216ENST00000530746 COL9A3Q14050 684 aaPredicted RBP17.42■□□□□ 0.38
PPFIA1-216ENST00000530746 GRM4Q14833 912 aa17.42■□□□□ 0.38
PPFIA1-216ENST00000530746 TSGA10IPQ3SY00 556 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms