RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 ZNF233A6NK53 670 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 MATR3P43243 847 aaKnown RBP eCLIP20.21■□□□□ 0.83
RPL38-205ENST00000530646 MEA1Q16626 185 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 TMEM67Q5HYA8 995 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 HAUS3Q68CZ6 603 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 TMED8Q6PL24 325 aaPredicted RBP20.21■□□□□ 0.83
RPL38-205ENST00000530646 NELFBQ8WX92 580 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 PUS3Q9BZE2 481 aaKnown RBP20.21■□□□□ 0.83
RPL38-205ENST00000530646 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 STIM2Q9P246 746 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 XDHP47989 1333 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 ZAP70P43403 619 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 IRF2BP1Q8IU81 584 aa20.21■□□□□ 0.83
RPL38-205ENST00000530646 FAM205CA6NFA0 338 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 SNCBQ16143 134 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 IQCKQ8N0W5 287 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 SLC12A7Q9Y666 1083 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 ERCC3P19447 782 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 TSR1Q2NL82 804 aaKnown RBP20.2■□□□□ 0.82
RPL38-205ENST00000530646 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 PARP9Q8IXQ6 854 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 SMCR8Q8TEV9 937 aaPredicted RBP20.2■□□□□ 0.82
RPL38-205ENST00000530646 SMARCAL1Q9NZC9 954 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 LAMB4A4D0S4 1761 aa20.2■□□□□ 0.82
RPL38-205ENST00000530646 H7C1W4 665 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 TNFRSF8P28908 595 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 CDR1P51861 262 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 CCNHP51946 323 aaPredicted RBP20.19■□□□□ 0.82
RPL38-205ENST00000530646 CYP27A1Q02318 531 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 DRP2Q13474 957 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 KIRREL3Q8IZU9 778 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 NHEJ1Q9H9Q4 299 aaPredicted RBP20.19■□□□□ 0.82
RPL38-205ENST00000530646 SHANK3Q9BYB0 1731 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 FAM107AO95990 144 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 PARP1P09874 1014 aaKnown RBP20.19■□□□□ 0.82
RPL38-205ENST00000530646 NR1D1P20393 614 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 CYLC1P35663 651 aaPredicted RBP20.19■□□□□ 0.82
RPL38-205ENST00000530646 CYB5D1Q6P9G0 228 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 FAM43BQ6ZT52 329 aaPredicted RBP20.19■□□□□ 0.82
RPL38-205ENST00000530646 CCDC82Q8N4S0 544 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 ZNF507Q8TCN5 953 aa20.19■□□□□ 0.82
RPL38-205ENST00000530646 CCDC43Q96MW1 224 aaKnown RBP20.19■□□□□ 0.82
RPL38-205ENST00000530646 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
RPL38-205ENST00000530646 FRMD3A2A2Y4 597 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 LGALS16A8MUM7 142 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 MDH1P40925 334 aaKnown RBP20.18■□□□□ 0.82
RPL38-205ENST00000530646 TLDC1Q6P9B6 456 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 FUKQ8N0W3 1084 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 PIK3R5Q8WYR1 880 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 CCDC114Q96M63 670 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 AGPAT5Q9NUQ2 364 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 EHD2Q9NZN4 543 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 A0A1W2PQC6 194 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 SPRED3Q2MJR0 410 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 CMTR1Q8N1G2 835 aaKnown RBP20.18■□□□□ 0.82
RPL38-205ENST00000530646 MAPK8IP1Q9UQF2 711 aa20.18■□□□□ 0.82
RPL38-205ENST00000530646 KLHL33A6NCF5 533 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 TRIM75PA6NK02 468 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 NBPF26B4DH59 902 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 FAM153BP0C7A2 387 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 LIFRP42702 1097 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 IRX1P78414 480 aaPredicted RBP20.17■□□□□ 0.82
RPL38-205ENST00000530646 GRIK3Q13003 919 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 FAM153CQ494X1 144 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 CFAP58Q5T655 872 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 NBPF10Q6P3W6 841 aaKnown RBP20.17■□□□□ 0.82
RPL38-205ENST00000530646 FMNL3Q8IVF7 1028 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 NBPF15Q8N660 670 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 FAM153AQ9UHL3 310 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 ASAP1Q9ULH1 1129 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.17■□□□□ 0.82
RPL38-205ENST00000530646 CAPN6Q9Y6Q1 641 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 TRIM22Q8IYM9 498 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 MAGEC3Q8TD91 643 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 MTRQ99707 1265 aa20.17■□□□□ 0.82
RPL38-205ENST00000530646 TPX2Q9ULW0 747 aaKnown RBP20.17■□□□□ 0.82
RPL38-205ENST00000530646 E7EVH7 732 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 DNM1LO00429 736 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 CIAO1O76071 339 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 SSBP05455 408 aaKnown RBP eCLIP20.16■□□□□ 0.82
RPL38-205ENST00000530646 KIF5AQ12840 1032 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 EARS2Q5JPH6 523 aaKnown RBP20.16■□□□□ 0.82
RPL38-205ENST00000530646 NFRKBQ6P4R8 1299 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 OSBPL9Q96SU4 736 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 ACTR5Q9H9F9 607 aaPredicted RBP20.16■□□□□ 0.82
RPL38-205ENST00000530646 RBM28Q9NW13 759 aaKnown RBP20.16■□□□□ 0.82
RPL38-205ENST00000530646 WNT7AO00755 349 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 IFIT3O14879 490 aaKnown RBP20.16■□□□□ 0.82
RPL38-205ENST00000530646 ZNF263O14978 683 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 PRLRP16471 622 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 VAV2P52735 878 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 CLNS1AP54105 237 aaKnown RBP20.16■□□□□ 0.82
RPL38-205ENST00000530646 CCDC170Q8IYT3 715 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 SHISA4Q96DD7 197 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 CYFIP2Q96F07 1278 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 TTYH3Q9C0H2 523 aa20.16■□□□□ 0.82
RPL38-205ENST00000530646 LRWD1Q9UFC0 647 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms