RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 SH3TC2Q8TF17 1288 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 PHKBQ93100 1093 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 ARMC5Q96C12 935 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 ZNF333Q96JL9 665 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC17Q96LX7 622 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 NUP62CLQ9H1M0 184 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 EHD4Q9H223 541 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
CMTM1-214ENST00000530141 PPP6R2O75170 966 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 TOP1P11387 765 aaKnown RBP9.42□□□□□ -0.9
CMTM1-214ENST00000530141 RASA1P20936 1047 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 CALML3P27482 149 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 SMARCA1P28370 1054 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 GRM4Q14833 912 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 MAP3K11Q16584 847 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 SLC4A8Q2Y0W8 1093 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 UVSSAQ2YD98 709 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 RILPL1Q5EBL4 403 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 DACT2Q5SW24 774 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 ANO1Q5XXA6 986 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 NBPF11Q86T75 865 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 CERS5Q8N5B7 392 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 AGBL3Q8NEM8 1001 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 LRCH3Q96II8 777 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 WNK4Q96J92 1243 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 CFHR5Q9BXR6 569 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 IDI2Q9BXS1 227 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 OSBPL5Q9H0X9 879 aaPredicted RBP9.42□□□□□ -0.9
CMTM1-214ENST00000530141 EFCC1Q9HA90 598 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 SH3GLB2Q9NR46 395 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 TMOD2Q9NZR1 351 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
CMTM1-214ENST00000530141 NOL7Q9UMY1 257 aaKnown RBP9.42□□□□□ -0.9
CMTM1-214ENST00000530141 MORC2Q9Y6X9 1032 aaPredicted RBP9.42□□□□□ -0.9
CMTM1-214ENST00000530141 MYH2Q9UKX2 1941 aa9.42□□□□□ -0.9
CMTM1-214ENST00000530141 SYCE3A1L190 88 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 F8W031 263 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 hCG_1984214I3L0E3 225 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 SPTLC2O15270 562 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 CAVIN2O95810 425 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC192P0DO97 292 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 NF2P35240 595 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 KRT2P35908 639 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ME1P48163 572 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 PLCD1P51178 756 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ADALQ6DHV7 355 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 GALNT17Q6IS24 598 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ARMC9Q7Z3E5 817 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 NOSTRINQ8IVI9 506 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ZNF713Q8N859 430 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 LINC00301Q8NCQ3 95 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC148Q8NFR7 591 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC12Q8WUD4 166 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 MRPS27Q92552 414 aaKnown RBP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 SHISA4Q96DD7 197 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ERO1AQ96HE7 468 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 USP28Q96RU2 1077 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 PTPN18Q99952 460 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ARHGAP39Q9C0H5 1083 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 CLSTN2Q9H4D0 955 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 SERPINB13Q9UIV8 391 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 RANBP2P49792 3224 aaKnown RBP9.41□□□□□ -0.9
CMTM1-214ENST00000530141 ALPK3Q96L96 1907 aa9.41□□□□□ -0.9
CMTM1-214ENST00000530141 COL2A1P02458 1487 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 CNTNAP5Q8WYK1 1306 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 KINO60870 393 aaKnown RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 ENTPD3O75355 529 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 SCG2P13521 617 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 NOVP48745 357 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 RBM5P52756 815 aaKnown RBP eCLIP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 GABPAQ06546 454 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC173Q0VFZ6 552 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 PICALMQ13492 652 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 SLC39A14Q15043 492 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 PFKFB3Q16875 520 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 SLC9C1Q4G0N8 1177 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 LDLRAD1Q5T700 205 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 OTUD7BQ6GQQ9 843 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 APOBEC3HQ6NTF7 200 aaKnown RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 KIAA0825Q8IV33 1275 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 FOXP4Q8IVH2 680 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 DIS3L2Q8IYB7 885 aaKnown RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC34Q96HJ3 373 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 TNMDQ9H2S6 317 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 PI4KBQ9UBF8 816 aa9.4□□□□□ -0.9
CMTM1-214ENST00000530141 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-214ENST00000530141 BAZ2AQ9UIF9 1905 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms