RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.41
COPB1-207ENST00000529866 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 PCDHA11Q9Y5I1 949 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 CHD7Q9P2D1 2997 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
COPB1-207ENST00000529866 USP17L12C9JPN9 530 aa12.51□□□□□ -0.41
COPB1-207ENST00000529866 USP17L21D6R901 530 aa12.51□□□□□ -0.41
COPB1-207ENST00000529866 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
COPB1-207ENST00000529866 TFF2Q03403 129 aa12.51□□□□□ -0.41
COPB1-207ENST00000529866 DIEXFQ68CQ4 756 aaKnown RBP12.51□□□□□ -0.41
COPB1-207ENST00000529866 CPXCR1Q8N123 301 aa12.51□□□□□ -0.41
COPB1-207ENST00000529866 CLASRPQ8N2M8 674 aaKnown RBP12.51□□□□□ -0.41
COPB1-207ENST00000529866 CHST13Q8NET6 341 aa12.51□□□□□ -0.41
COPB1-207ENST00000529866 RIPK3Q9Y572 518 aa12.51□□□□□ -0.41
COPB1-207ENST00000529866 ADCY6O43306 1168 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 PRKAB2O43741 272 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 NDUFB10O96000 172 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 PFKMP08237 780 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 IFIT2P09913 472 aaKnown RBP12.5□□□□□ -0.41
COPB1-207ENST00000529866 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
COPB1-207ENST00000529866 RABGGTBP53611 331 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 CCL23P55773 120 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 NKX3-2P78367 333 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 ITGA7Q13683 1181 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 CEP85Q6P2H3 762 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 TLK2Q86UE8 772 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 NUP88Q99567 741 aaPredicted RBP12.5□□□□□ -0.41
COPB1-207ENST00000529866 NOC4LQ9BVI4 516 aaKnown RBP12.5□□□□□ -0.41
COPB1-207ENST00000529866 AP5M1Q9H0R1 490 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 IL1RAPL2Q9NP60 686 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 ARPP21Q9UBL0 812 aaPredicted RBP12.5□□□□□ -0.41
COPB1-207ENST00000529866 COG5Q9UP83 839 aa12.5□□□□□ -0.41
COPB1-207ENST00000529866 MYO5AQ9Y4I1 1855 aaKnown RBP12.49□□□□□ -0.41
COPB1-207ENST00000529866 UMODL1Q5DID0 1318 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 F5H6K3 240 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 ADD2P35612 726 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 KCNQ1P51787 676 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 OAZ1P54368 228 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 BEX3Q00994 111 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 KLRC3Q07444 240 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 FSCN1Q16658 493 aaKnown RBP12.49□□□□□ -0.41
COPB1-207ENST00000529866 TMEM67Q5HYA8 995 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 RHPN1Q8TCX5 695 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 RAVER2Q9HCJ3 691 aaKnown RBP12.49□□□□□ -0.41
COPB1-207ENST00000529866 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 SLC4A4Q9Y6R1 1079 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
COPB1-207ENST00000529866 ASB14A6NK59 587 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 CTAGE5O15320 804 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 MYOGP15173 224 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 POU3F3P20264 500 aaPredicted RBP12.48□□□□□ -0.41
COPB1-207ENST00000529866 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 FGD4Q96M96 766 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 WNT8AQ9H1J5 351 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 MKNK2Q9HBH9 465 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 FEM1BQ9UK73 627 aa12.48□□□□□ -0.41
COPB1-207ENST00000529866 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 SMIM22K7EJ46 135 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 B4GALT4O60513 344 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 CA3P07451 260 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 FDX1P10109 184 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 ACTN1P12814 892 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 UBE3CQ15386 1083 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.47□□□□□ -0.41
COPB1-207ENST00000529866 KATNBL1Q9H079 304 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 TRPV6Q9H1D0 765 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 EPHX3Q9H6B9 360 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 SYNPO2Q9UMS6 1093 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 GNEQ9Y223 722 aaKnown RBP12.47□□□□□ -0.41
COPB1-207ENST00000529866 MTCH2Q9Y6C9 303 aa12.47□□□□□ -0.41
COPB1-207ENST00000529866 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.46□□□□□ -0.41
COPB1-207ENST00000529866 DYNC1LI2O43237 492 aaPredicted RBP12.46□□□□□ -0.41
COPB1-207ENST00000529866 ZSCAN25Q6NSZ9 544 aa12.46□□□□□ -0.41
COPB1-207ENST00000529866 HLA-CQ95604 372 aa12.46□□□□□ -0.41
COPB1-207ENST00000529866 SCLYQ96I15 445 aa12.46□□□□□ -0.41
COPB1-207ENST00000529866 SLC9A7Q96T83 725 aa12.46□□□□□ -0.41
COPB1-207ENST00000529866 ZNF287Q9HBT7 754 aa12.46□□□□□ -0.41
COPB1-207ENST00000529866 COG6Q9Y2V7 657 aa12.46□□□□□ -0.41
COPB1-207ENST00000529866 Q9Y3F1 56 aa12.46□□□□□ -0.41
COPB1-207ENST00000529866 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.42
COPB1-207ENST00000529866 PLXNA1Q9UIW2 1896 aa12.46□□□□□ -0.42
COPB1-207ENST00000529866 ASTN1O14525 1302 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 CNTN2Q02246 1040 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
COPB1-207ENST00000529866 FAM133AQ8N9E0 248 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms