RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ARMCX2Q7L311 632 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 SH3RF1Q7Z6J0 888 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 OTUD7AQ8TE49 926 aaPredicted RBP18.53■□□□□ 0.56
CTSB-215ENST00000528965 GLT1D1Q96MS3 346 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 TOX2Q96NM4 488 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 TMEM39AQ9NV64 488 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 C6orf222P0C671 652 aaPredicted RBP18.52■□□□□ 0.56
CTSB-215ENST00000528965 SMAD3P84022 425 aaKnown RBP18.52■□□□□ 0.56
CTSB-215ENST00000528965 FPGSQ05932 587 aa18.52■□□□□ 0.56
CTSB-215ENST00000528965 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.56
CTSB-215ENST00000528965 ANKRD33Q7Z3H0 272 aa18.52■□□□□ 0.56
CTSB-215ENST00000528965 KLHDC9Q8NEP7 349 aa18.52■□□□□ 0.56
CTSB-215ENST00000528965 STAG1Q8WVM7 1258 aa18.52■□□□□ 0.56
CTSB-215ENST00000528965 EVI5LQ96CN4 794 aa18.52■□□□□ 0.56
CTSB-215ENST00000528965 SMCHD1A6NHR9 2005 aa18.52■□□□□ 0.55
CTSB-215ENST00000528965 ELP1O95163 1332 aa18.51■□□□□ 0.55
CTSB-215ENST00000528965 PLA2G6O60733 806 aa18.51■□□□□ 0.55
CTSB-215ENST00000528965 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
CTSB-215ENST00000528965 KCNA10Q16322 511 aa18.51■□□□□ 0.55
CTSB-215ENST00000528965 RNPC3Q96LT9 517 aaKnown RBP18.51■□□□□ 0.55
CTSB-215ENST00000528965 FAM161BQ96MY7 647 aa18.51■□□□□ 0.55
CTSB-215ENST00000528965 GUCD1Q96NT3 240 aa18.51■□□□□ 0.55
CTSB-215ENST00000528965 RNF146Q9NTX7 359 aa18.51■□□□□ 0.55
CTSB-215ENST00000528965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.51■□□□□ 0.556e-6■■□□□ 13.9
CTSB-215ENST00000528965 COL6A3P12111 3177 aa18.51■□□□□ 0.55
CTSB-215ENST00000528965 ASB14A6NK59 587 aa18.5■□□□□ 0.55
CTSB-215ENST00000528965 CCDC144BQ3MJ40 725 aa18.5■□□□□ 0.55
CTSB-215ENST00000528965 ANKRD45Q5TZF3 282 aa18.5■□□□□ 0.55
CTSB-215ENST00000528965 CCDC174Q6PII3 467 aa18.5■□□□□ 0.55
CTSB-215ENST00000528965 UPF3AQ9H1J1 476 aaKnown RBP18.5■□□□□ 0.55
CTSB-215ENST00000528965 A0A0U1RQG5 324 aaPredicted RBP18.49■□□□□ 0.55
CTSB-215ENST00000528965 RANBP6O60518 1105 aaKnown RBP18.49■□□□□ 0.55
CTSB-215ENST00000528965 MCCP23508 829 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 GJA9P57773 515 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 CCDC129Q6ZRS4 1044 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 TICAM2Q86XR7 235 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 CCDC144CPQ8IYA2 1237 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 FGD4Q96M96 766 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 A1CFQ9NQ94 594 aaKnown RBP18.49■□□□□ 0.55
CTSB-215ENST00000528965 HELLSQ9NRZ9 838 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 ANAPC4Q9UJX5 808 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 SALL3Q9BXA9 1300 aa18.49■□□□□ 0.55
CTSB-215ENST00000528965 TMEM265A0A087WTH1 108 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
CTSB-215ENST00000528965 ASGR1P07306 291 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 ALAS1P13196 640 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 CTDSPL2Q05D32 466 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 FAAP100Q0VG06 881 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 CCDC96Q2M329 555 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 GNASQ5JWF2 1037 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 CCSAPQ6IQ19 270 aaPredicted RBP18.48■□□□□ 0.55
CTSB-215ENST00000528965 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 KCTD1Q719H9 257 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
CTSB-215ENST00000528965 FAM133AQ8N9E0 248 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 AGBL1Q96MI9 1066 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 TRERF1Q96PN7 1200 aa18.48■□□□□ 0.55
CTSB-215ENST00000528965 MYADML2A6NDP7 307 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 ORC4O43929 436 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 ITGB8P26012 769 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 CNTN2Q02246 1040 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 DCAF4Q8WV16 495 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 TOMM22Q9NS69 142 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 CCPG1Q9ULG6 757 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 ZNF536O15090 1300 aa18.47■□□□□ 0.55
CTSB-215ENST00000528965 FOXP2O15409 715 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 TIMP1P01033 207 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 TNFAIP2Q03169 654 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 PPIGQ13427 754 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTSB-215ENST00000528965 ALX1Q15699 326 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 SEMA6BQ9H3T3 888 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 PRR12Q9ULL5 1215 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 ZMYM6O95789 1325 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 CUL9Q8IWT3 2517 aa18.46■□□□□ 0.55
CTSB-215ENST00000528965 ARVCFO00192 962 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 ADCY6O43306 1168 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 ZEB2O60315 1214 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 NMT2O60551 498 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 CABYRO75952 493 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 PDE1AP54750 535 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 NKX3-2P78367 333 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 HDAC1Q13547 482 aaPredicted RBP18.45■□□□□ 0.54
CTSB-215ENST00000528965 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
CTSB-215ENST00000528965 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 CDX2Q99626 313 aaPredicted RBP18.45■□□□□ 0.54
CTSB-215ENST00000528965 KATNBL1Q9H079 304 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 AP5M1Q9H0R1 490 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 IL17RBQ9NRM6 502 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 PNMA2Q9UL42 364 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 MTMR7Q9Y216 660 aa18.45■□□□□ 0.54
CTSB-215ENST00000528965 ICAM1P05362 532 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 TOP1P11387 765 aaKnown RBP18.44■□□□□ 0.54
CTSB-215ENST00000528965 MCMDC2Q4G0Z9 681 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 NSMFQ6X4W1 530 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 TLK2Q86UE8 772 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms