RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 FRMPD3Q5JV73 1810 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 ZNF865P0CJ78 1059 aaPredicted RBP17.13■□□□□ 0.33
PACS1-207ENST00000528935 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
PACS1-207ENST00000528935 TAL1P17542 331 aaPredicted RBP17.13■□□□□ 0.33
PACS1-207ENST00000528935 FXR1P51114 621 aaKnown RBP eCLIP17.13■□□□□ 0.33
PACS1-207ENST00000528935 CCDC96Q2M329 555 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 TKFCQ3LXA3 575 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
PACS1-207ENST00000528935 MAMDC4Q6UXC1 1216 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 RASGRP2Q7LDG7 609 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 AGBL1Q96MI9 1066 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 HOMER2Q9NSB8 354 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 CTNNA3Q9UI47 895 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
PACS1-207ENST00000528935 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
PACS1-207ENST00000528935 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
PACS1-207ENST00000528935 KBTBD13C9JR72 458 aa17.12■□□□□ 0.33
PACS1-207ENST00000528935 SNAI1O95863 264 aaPredicted RBP17.12■□□□□ 0.33
PACS1-207ENST00000528935 RARBP10826 455 aa17.12■□□□□ 0.33
PACS1-207ENST00000528935 BTNL9Q6UXG8 535 aa17.12■□□□□ 0.33
PACS1-207ENST00000528935 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
PACS1-207ENST00000528935 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
PACS1-207ENST00000528935 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
PACS1-207ENST00000528935 NEDD4P46934 1319 aa17.12■□□□□ 0.33
PACS1-207ENST00000528935 TRIOBPQ9H2D6 2365 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 AKR1A1P14550 325 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 SNAP25P60880 206 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 LRRC41Q15345 812 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 IMMTQ16891 758 aaKnown RBP17.11■□□□□ 0.33
PACS1-207ENST00000528935 CCDC178Q5BJE1 867 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 CCDC174Q6PII3 467 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 DGKHQ86XP1 1220 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 TRERF1Q96PN7 1200 aa17.11■□□□□ 0.33
PACS1-207ENST00000528935 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
PACS1-207ENST00000528935 PDHBP11177 359 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 ALAS1P13196 640 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 SYN1P17600 705 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 SLC16A2P36021 539 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 FGD4Q96M96 766 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 GDF15Q99988 308 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 RANBP17Q9H2T7 1088 aaKnown RBP17.1■□□□□ 0.33
PACS1-207ENST00000528935 GPCPD1Q9NPB8 672 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 A1CFQ9NQ94 594 aaKnown RBP17.1■□□□□ 0.33
PACS1-207ENST00000528935 XPNPEP3Q9NQH7 507 aa17.1■□□□□ 0.33
PACS1-207ENST00000528935 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 KDM4AO75164 1064 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 ICAM1P05362 532 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 SNHG28P0DPA3 235 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 BMP8BP34820 402 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 ATN1P54259 1190 aaPredicted RBP17.09■□□□□ 0.33
PACS1-207ENST00000528935 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 IQCA1Q86XH1 822 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 FAM133AQ8N9E0 248 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 RUFY2Q8WXA3 655 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 ZKSCAN3Q9BRR0 538 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 IL25Q9H293 177 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
PACS1-207ENST00000528935 ZHX1Q9UKY1 873 aaPredicted RBP17.09■□□□□ 0.33
PACS1-207ENST00000528935 FAM184BQ9ULE4 1060 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
PACS1-207ENST00000528935 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
PACS1-207ENST00000528935 RAD50Q92878 1312 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 CHMLP26374 656 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 ADCYAP1R1P41586 468 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 ZNF543Q08ER8 600 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 ACVR2BQ13705 512 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 SLC39A5Q6ZMH5 540 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 RNF180Q86T96 592 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 ANKS1AQ92625 1134 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 KRT23Q9C075 422 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 ABHD16BQ9H3Z7 469 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.32
PACS1-207ENST00000528935 B4E1Z4 1266 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 PGK1P00558 417 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
PACS1-207ENST00000528935 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 ARMCX2Q7L311 632 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
PACS1-207ENST00000528935 CNNM2Q9H8M5 875 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 ZSWIM5Q9P217 1185 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 PHF24Q9UPV7 400 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
PACS1-207ENST00000528935 SOWAHBA6NEL2 793 aa17.06■□□□□ 0.32
PACS1-207ENST00000528935 RTP1P59025 263 aa17.06■□□□□ 0.32
PACS1-207ENST00000528935 SNX17Q15036 470 aa17.06■□□□□ 0.32
PACS1-207ENST00000528935 GPATCH4Q5T3I0 446 aaKnown RBP17.06■□□□□ 0.32
PACS1-207ENST00000528935 PNMA1Q8ND90 353 aa17.06■□□□□ 0.32
PACS1-207ENST00000528935 FERMT2Q96AC1 680 aa17.06■□□□□ 0.32
PACS1-207ENST00000528935 LENG1Q96BZ8 264 aaPredicted RBP17.06■□□□□ 0.32
PACS1-207ENST00000528935 CYP39A1Q9NYL5 469 aa17.06■□□□□ 0.32
PACS1-207ENST00000528935 ASB14A6NK59 587 aa17.05■□□□□ 0.32
PACS1-207ENST00000528935 ADAMTS4O75173 837 aa17.05■□□□□ 0.32
PACS1-207ENST00000528935 DUSP11O75319 330 aaKnown RBP17.05■□□□□ 0.32
PACS1-207ENST00000528935 CCDC144BQ3MJ40 725 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms