RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 TRIB2Q92519 343 aa20.38■□□□□ 0.85
CHRDL2-206ENST00000528789 APBA2Q99767 749 aa20.38■□□□□ 0.85
CHRDL2-206ENST00000528789 VAT1LQ9HCJ6 419 aa20.38■□□□□ 0.85
CHRDL2-206ENST00000528789 MAD2L2Q9UI95 211 aa20.38■□□□□ 0.85
CHRDL2-206ENST00000528789 CCDC69A6NI79 296 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 EPB41L2O43491 1005 aaKnown RBP20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 DHX16O60231 1041 aaKnown RBP20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 COBLO75128 1261 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 INHAP05111 366 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 ALAS1P13196 640 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 SOX10P56693 466 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 EXOSC10Q01780 885 aaKnown RBP20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 TROAPQ12815 778 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 TRIM32Q13049 653 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 KCTD2Q14681 263 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 DPP9Q86TI2 863 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 ADGRF4Q8IZF3 695 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 ZNF654Q8IZM8 581 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 NPLOC4Q8TAT6 608 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 RNF146Q9NTX7 359 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 CCPG1Q9ULG6 757 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 CENPFP49454 3210 aa20.37■□□□□ 0.85
CHRDL2-206ENST00000528789 PALM3A6NDB9 673 aaPredicted RBP20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 KLRF2D3W0D1 207 aa20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 ICAM1P05362 532 aa20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 PGK2P07205 417 aa20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 XRCC5P13010 732 aaKnown RBP20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 RXRAP19793 462 aa20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 UBXN2AP68543 259 aa20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 MTFR1Q15390 333 aa20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 FLRT1Q9NZU1 646 aa20.36■□□□□ 0.85
CHRDL2-206ENST00000528789 WDR19Q8NEZ3 1342 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 DDAH1O94760 285 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 SEC24BO95487 1268 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 HMGCRP04035 888 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 HMGB1P09429 215 aaKnown RBP20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 LIFRP42702 1097 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 CDC37Q16543 378 aaPredicted RBP20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 BLOC1S2Q6QNY1 142 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 CCDC144CPQ8IYA2 1237 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 ABRAQ8N0Z2 381 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 TMTC2Q8N394 836 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 CHST13Q8NET6 341 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 TRERF1Q96PN7 1200 aa20.35■□□□□ 0.85
CHRDL2-206ENST00000528789 ZNF236Q9UL36 1845 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 HOXC6P09630 235 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 CASTP20810 708 aaKnown RBP20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 TKFCQ3LXA3 575 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 MUM1L1Q5H9M0 696 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 ANKRD35Q8N283 1001 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 ACAD9Q9H845 621 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 JMJD4Q9H9V9 463 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 FBXO40Q9UH90 709 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 SLC12A7Q9Y666 1083 aa20.34■□□□□ 0.85
CHRDL2-206ENST00000528789 CCL5P13501 91 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 RPS6KB1P23443 525 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 PSMA5P28066 241 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 FGD1P98174 961 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 SLC35G1Q2M3R5 365 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 USH1GQ495M9 461 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 CTCFLQ8NI51 663 aaPredicted RBP20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 DDX11Q96FC9 970 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 UNC93B1Q9H1C4 597 aa20.33■□□□□ 0.85
CHRDL2-206ENST00000528789 SMCHD1A6NHR9 2005 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 ZNFX1Q9P2E3 1918 aaKnown RBP20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 QRICH1Q2TAL8 776 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 C8orf34Q49A92 452 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 Q6ZUG5 572 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 SGMS1Q86VZ5 419 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 TRMT44Q8IYL2 757 aaKnown RBP20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 TMEM106CQ9BVX2 250 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 SLC5A4Q9NY91 659 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
CHRDL2-206ENST00000528789 POTEFA5A3E0 1075 aa20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 CYP2C19P33261 490 aa20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 ZNF792Q3KQV3 632 aa20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 SYNE3Q6ZMZ3 975 aa20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 HOMER1Q86YM7 354 aa20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 PIBF1Q8WXW3 757 aa20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 RNF208Q9H0X6 261 aa20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 A1CFQ9NQ94 594 aaKnown RBP20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 NAP1L2Q9ULW6 460 aaPredicted RBP20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 KIAA0100Q14667 2235 aaKnown RBP20.31■□□□□ 0.84
CHRDL2-206ENST00000528789 KLF18A0A0U1RQI7 1052 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 PLEKHA8P1O95397 391 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 CALM1P0DP23 149 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 CALM2P0DP24 149 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 CALM3P0DP25 149 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 KIF5BP33176 963 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 CACNB2Q08289 660 aaPredicted RBP20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 MFSD14CQ5VZR4 134 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 APOA5Q6Q788 366 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 NSMFQ6X4W1 530 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 CMTR1Q8N1G2 835 aaKnown RBP20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 MAML3Q96JK9 1138 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 PIGSQ96S52 555 aa20.3■□□□□ 0.84
CHRDL2-206ENST00000528789 MAP3K14Q99558 947 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms