RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 NOSTRINQ8IVI9 506 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 FMR1NBQ8N0W7 255 aaPredicted RBP13.47□□□□□ -0.25
USF1-208ENST00000528768 WRNIP1Q96S55 665 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 GDF15Q99988 308 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 MYL10Q9BUA6 226 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 TMEM39BQ9GZU3 492 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 INCENPQ9NQS7 918 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
USF1-208ENST00000528768 CPA4Q9UI42 421 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 ADGRA2Q96PE1 1338 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 TCP10L2B9ZVM9 353 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 PRPF3O43395 683 aaKnown RBP13.46□□□□□ -0.25
USF1-208ENST00000528768 TFRCP02786 760 aaKnown RBP13.46□□□□□ -0.25
USF1-208ENST00000528768 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
USF1-208ENST00000528768 SNW1Q13573 536 aaKnown RBP13.46□□□□□ -0.25
USF1-208ENST00000528768 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 STK11IPQ8N1F8 1099 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 PXYLP1Q8TE99 480 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 PARK7Q99497 189 aaKnown RBP13.46□□□□□ -0.25
USF1-208ENST00000528768 FTOQ9C0B1 505 aaKnown RBP eCLIP13.46□□□□□ -0.25
USF1-208ENST00000528768 GOLPH3LQ9H4A5 285 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 SENP2Q9HC62 589 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
USF1-208ENST00000528768 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.46□□□□□ -0.25
USF1-208ENST00000528768 FAM13BQ9NYF5 915 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.25
USF1-208ENST00000528768 MYH13Q9UKX3 1938 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 TSPY2A6NKD2 308 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 KIF28PB7ZC32 967 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 PDHXO00330 501 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 CRKP46108 304 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 GNAQP50148 359 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 PPP4CP60510 307 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 DHX8Q14562 1220 aaKnown RBP13.45□□□□□ -0.26
USF1-208ENST00000528768 NECAB2Q7Z6G3 386 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 DIS3L2Q8IYB7 885 aaKnown RBP13.45□□□□□ -0.26
USF1-208ENST00000528768 ANKLE1Q8NAG6 615 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 COL25A1Q9BXS0 654 aaPredicted RBP13.45□□□□□ -0.26
USF1-208ENST00000528768 UNC93B1Q9H1C4 597 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 DNAJC25Q9H1X3 360 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 MTMR10Q9NXD2 777 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.45□□□□□ -0.26
USF1-208ENST00000528768 ZSWIM8A7E2V4 1837 aa13.45□□□□□ -0.26
USF1-208ENST00000528768 A0A1B0GVL5 298 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 SMTNL1A8MU46 457 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 ADCY3O60266 1144 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 OFD1O75665 1012 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 ZNF202O95125 648 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 CTGFP29279 349 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 PRDX5P30044 214 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 SYKP43405 635 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 NDUFA8P51970 172 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 PRKCZQ05513 592 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 IRF5Q13568 498 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 ELOA2Q8IYF1 753 aaPredicted RBP13.44□□□□□ -0.26
USF1-208ENST00000528768 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
USF1-208ENST00000528768 KRI1Q8N9T8 703 aaKnown RBP13.44□□□□□ -0.26
USF1-208ENST00000528768 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
USF1-208ENST00000528768 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 MCM9Q9NXL9 1143 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 KIAA1468Q9P260 1216 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 KCNH4Q9UQ05 1017 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
USF1-208ENST00000528768 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 PFKFB1P16118 471 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 CDC25BP30305 580 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 KRT2P35908 639 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.43□□□□□ -0.26
USF1-208ENST00000528768 CDAN1Q8IWY9 1227 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 TDHQ8IZJ6 230 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 ZNF444Q8N0Y2 327 aaPredicted RBP13.43□□□□□ -0.26
USF1-208ENST00000528768 ZKSCAN4Q969J2 545 aaPredicted RBP13.43□□□□□ -0.26
USF1-208ENST00000528768 BPIFA3Q9BQP9 254 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 MRIQ9BWK5 157 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 ZNF341Q9BYN7 854 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 CRISPLD2Q9H0B8 497 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 KAT14Q9H8E8 782 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 MKNK2Q9HBH9 465 aa13.43□□□□□ -0.26
USF1-208ENST00000528768 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
USF1-208ENST00000528768 MORC2Q9Y6X9 1032 aaPredicted RBP13.43□□□□□ -0.26
USF1-208ENST00000528768 BCRP11274 1271 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 TERF1P54274 439 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 PTPAQ15257 358 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 AXDND1Q5T1B0 1012 aaPredicted RBP13.42□□□□□ -0.26
USF1-208ENST00000528768 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 SARM1Q6SZW1 724 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 FAM177A1Q8N128 213 aaPredicted RBP13.42□□□□□ -0.26
USF1-208ENST00000528768 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
USF1-208ENST00000528768 ZNF384Q8TF68 577 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 DEFB118Q96PH6 123 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms