RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 RFC1P35251 1148 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-218ENST00000528232 NCBP1Q09161 790 aaKnown RBP7.96□□□□□ -1.14
CTNND1-218ENST00000528232 SFMBT2Q5VUG0 894 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 TMC4Q7Z404 712 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 OSBP2Q969R2 916 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 ACTR5Q9H9F9 607 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-218ENST00000528232 ZBED4O75132 1171 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 KIF23Q02241 960 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-218ENST00000528232 ELF2Q15723 593 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 SPATA1Q5VX52 437 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 ARMC9Q7Z3E5 817 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 APBB1IPQ7Z5R6 666 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-218ENST00000528232 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 CLIC6Q96NY7 704 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 BCAP29Q9UHQ4 241 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 RCOR1Q9UKL0 485 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 SSX2IPQ9Y2D8 614 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 ATP6V0A2Q9Y487 856 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 KLRF2D3W0D1 207 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 GOLGA8KD6RF30 607 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 H7C1D1 291 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 HIP1RO75146 1068 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 NT5C2P49902 561 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 RESTQ13127 1097 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 C8orf74Q6P047 294 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.14
CTNND1-218ENST00000528232 FNBP1Q96RU3 617 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 CUEDC2Q9H467 287 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 PKD2L1Q9P0L9 805 aa7.96□□□□□ -1.14
CTNND1-218ENST00000528232 PPLO60437 1756 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 IKBKBO14920 756 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 SMIM24O75264 130 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 GMNNO75496 209 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 LARGE1O95461 756 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 RPN1P04843 607 aaKnown RBP7.95□□□□□ -1.14
CTNND1-218ENST00000528232 USH1GQ495M9 461 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
CTNND1-218ENST00000528232 PUS7LQ9H0K6 701 aaKnown RBP7.95□□□□□ -1.14
CTNND1-218ENST00000528232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.95□□□□□ -1.14
CTNND1-218ENST00000528232 OVOS2A0A0J9YW53 1432 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 hCG_1984214I3L0E3 225 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 STX10O60499 249 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 INF2Q27J81 1249 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 MAP3K21Q5TCX8 1036 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 OVOS2Q6IE36 1432 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 LARGE2Q8N3Y3 721 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 ZNF713Q8N859 430 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-218ENST00000528232 PIGBQ92521 554 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 CAPN7Q9Y6W3 813 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 IGKV5-2P06315 115 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 ZBTB16Q05516 673 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 PPP1R7Q15435 360 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 SYCE1Q8N0S2 351 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 MYCT1Q8N699 235 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 CHURC1Q8WUH1 139 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 STAMQ92783 540 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 Q9H521 79 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 MRPL44Q9H9J2 332 aaKnown RBP7.95□□□□□ -1.14
CTNND1-218ENST00000528232 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 WDR19Q8NEZ3 1342 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 MMP1P03956 469 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 GJC1P36383 396 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 MAGEA1P43355 309 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 DNM2P50570 870 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 TCP10Q12799 353 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 CALCOCO2Q13137 446 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 TRPC3Q13507 836 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 ERFEQ4G0M1 354 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 IFT20Q8IY31 132 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 UBL4BQ8N7F7 174 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 LINC00301Q8NCQ3 95 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 SELENOSQ9BQE4 189 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 SLF1Q9BQI6 1058 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 PSTPIP2Q9H939 334 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 DIP2AQ14689 1571 aa7.95□□□□□ -1.14
CTNND1-218ENST00000528232 CDHR2Q9BYE9 1310 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 PSDA5PKW4 1024 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-218ENST00000528232 CCDC169A6NNP5 214 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 CYP27B1O15528 508 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 RNF8O76064 485 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 KRT5P13647 590 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 ADKP55263 362 aaKnown RBP7.94□□□□□ -1.14
CTNND1-218ENST00000528232 STRN3Q13033 797 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 MAP7D1Q3KQU3 841 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 MYOCDQ8IZQ8 938 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 GPKOWQ92917 476 aaPredicted RBP eCLIP7.94□□□□□ -1.14
CTNND1-218ENST00000528232 CHAMP1Q96JM3 812 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 GSDMAQ96QA5 445 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.94□□□□□ -1.14
CTNND1-218ENST00000528232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.94□□□□□ -1.145e-6■■■□□ 17.3
CTNND1-218ENST00000528232 MROH2AA6NES4 1674 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 ABCC12Q96J65 1359 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 FRMPD2Q68DX3 1309 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-218ENST00000528232 FLOT1O75955 427 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 GCNT3O95395 438 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 TPD52P55327 224 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-218ENST00000528232 DLGAP5Q15398 846 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 APLFQ8IW19 511 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-218ENST00000528232 LCORLQ8N3X6 602 aa7.94□□□□□ -1.14
CTNND1-218ENST00000528232 FAM212AQ96EL1 285 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms