RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 HSD3B7Q9H2F3 369 aa19.62■□□□□ 0.73
PCDHA6-202ENST00000527624 PDCL3Q9H2J4 239 aa19.62■□□□□ 0.73
PCDHA6-202ENST00000527624 TCP10L2B9ZVM9 353 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 ATP1A3P13637 1013 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 MORC3Q14149 939 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 GRIPAP1Q4V328 841 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 TATDN1Q6P1N9 297 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 USP17L10C9JJH3 530 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 CCNT1O60563 726 aaKnown RBP19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 PPP1R11O60927 126 aaPredicted RBP19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 GTF2F1P35269 517 aaKnown RBP eCLIP19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 LONP1P36776 959 aaKnown RBP19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 GPATCH4Q5T3I0 446 aaKnown RBP19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 DTHD1Q6ZMT9 781 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 SH3RF1Q7Z6J0 888 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 CCDC34Q96HJ3 373 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 KANSL2Q9H9L4 492 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 IFNKQ9P0W0 207 aa19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 GREB1LQ9C091 1923 aaPredicted RBP19.61■□□□□ 0.73
PCDHA6-202ENST00000527624 SPDYE2BA6NHP3 402 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 PP2D1A8MPX8 630 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ENTPD3O75355 529 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 SPDYE6P0CI01 402 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ICA1Q05084 483 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 E2F4Q16254 413 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 IQUBQ8NA54 791 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 SPATA20Q8TB22 786 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 TBCKQ8TEA7 893 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 XPO4Q9C0E2 1151 aaKnown RBP19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 PNMA6FA0A0J9YX94 578 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ESYT2A0FGR8 921 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 hCG_1984214I3L0E3 225 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 VIL1P09327 827 aaKnown RBP19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ADCY7P51828 1080 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 JAG1P78504 1218 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ABCB5Q2M3G0 1257 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 FILIP1Q7Z7B0 1213 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 SIAH1Q8IUQ4 282 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ZNF713Q8N859 430 aaPredicted RBP19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ATF5Q9Y2D1 282 aaPredicted RBP19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 ATRNL1Q5VV63 1379 aa19.6■□□□□ 0.73
PCDHA6-202ENST00000527624 SLC1A4P43007 532 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 KARSQ15046 597 aaKnown RBP19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 NEK8Q86SG6 692 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 TMOD2Q9NZR1 351 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 NYAP2Q9P242 653 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 FMR1Q06787 632 aaKnown RBP eCLIP19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 RRP1BQ14684 758 aaKnown RBP19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 ARID5BQ14865 1188 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 DLGAP5Q15398 846 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 SLFN13Q68D06 897 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 TMEM179Q6ZVK1 233 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 LRRC8AQ8IWT6 810 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 OGFOD1Q8N543 542 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 TRIML1Q8N9V2 468 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 MLKLQ8NB16 471 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 GMLQ99445 158 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 BLZF1Q9H2G9 400 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 FANCLQ9NW38 375 aa19.59■□□□□ 0.73
PCDHA6-202ENST00000527624 GH2P01242 217 aa19.58■□□□□ 0.73
PCDHA6-202ENST00000527624 TXLNAP40222 546 aa19.58■□□□□ 0.73
PCDHA6-202ENST00000527624 DPYDQ12882 1025 aa19.58■□□□□ 0.73
PCDHA6-202ENST00000527624 PDXDC2PQ6P474 469 aa19.58■□□□□ 0.73
PCDHA6-202ENST00000527624 TRMT44Q8IYL2 757 aaKnown RBP19.58■□□□□ 0.73
PCDHA6-202ENST00000527624 MKL1Q969V6 931 aa19.58■□□□□ 0.73
PCDHA6-202ENST00000527624 MYH4Q9Y623 1939 aa19.58■□□□□ 0.72
PCDHA6-202ENST00000527624 NEMFO60524 1076 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 FANCCQ00597 558 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 HSP90AA4PQ58FG1 418 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 NIM1KQ8IY84 436 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 RASSF8Q8NHQ8 419 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 HDAC9Q9UKV0 1011 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 ZBTB5O15062 677 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 UBE2SQ16763 222 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 MAP7D2Q96T17 732 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 NUP88Q99567 741 aaPredicted RBP19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 MTRQ99707 1265 aa19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 ZNF70Q9UC06 446 aaPredicted RBP19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 PPP1R1BQ9UD71 204 aaPredicted RBP19.57■□□□□ 0.72
PCDHA6-202ENST00000527624 OR52Z1P0C646 297 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 STAT6P42226 847 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 PLIN2Q99541 437 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 PIM2Q9P1W9 311 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 DACH1Q9UI36 760 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 ZNRF3Q9ULT6 936 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 LAD1O00515 517 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 RBM26Q5T8P6 1007 aaKnown RBP19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 SMYD4Q8IYR2 804 aaPredicted RBP19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 DCAF4Q8WV16 495 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 VEZTQ9HBM0 779 aa19.56■□□□□ 0.72
PCDHA6-202ENST00000527624 F5H6K3 240 aa19.55■□□□□ 0.72
PCDHA6-202ENST00000527624 SERPINC1P01008 464 aa19.55■□□□□ 0.72
PCDHA6-202ENST00000527624 PRPHP41219 470 aa19.55■□□□□ 0.72
PCDHA6-202ENST00000527624 UBA7P41226 1012 aa19.55■□□□□ 0.72
PCDHA6-202ENST00000527624 TNNI2P48788 182 aa19.55■□□□□ 0.72
PCDHA6-202ENST00000527624 KLRC3Q07444 240 aa19.55■□□□□ 0.72
PCDHA6-202ENST00000527624 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms