RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 CDC37L1Q7L3B6 337 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 SPATA17Q96L03 361 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
FGFR1-227ENST00000526570 CTIFO43310 598 aaKnown RBP13.56□□□□□ -0.24
FGFR1-227ENST00000526570 NR1I2O75469 434 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 TRPA1O75762 1119 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
FGFR1-227ENST00000526570 OCA2Q04671 838 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 PLS1Q14651 629 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 CREB3L3Q68CJ9 461 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 TRIML2Q8N7C3 387 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 LZTS1Q9Y250 596 aa13.56□□□□□ -0.24
FGFR1-227ENST00000526570 NEURL1BA8MQ27 555 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 ZNF449Q6P9G9 518 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 KIF9Q9HAQ2 790 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 TXLNGQ9NUQ3 528 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 NDC80O14777 642 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 TBC1D1Q86TI0 1168 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-227ENST00000526570 TNNI2P48788 182 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 GNAQP50148 359 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 NAPAP54920 295 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 INAQ16352 499 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-227ENST00000526570 MYLK4Q86YV6 388 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-227ENST00000526570 DHX58Q96C10 678 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 ARMT1Q9H993 441 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 PNMA6EA0A0J9YXQ4 647 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 ZNF189O75820 626 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-227ENST00000526570 RXRBP28702 533 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 CFAP221Q4G0U5 840 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 OLFML1Q6UWY5 402 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 OTUD7AQ8TE49 926 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-227ENST00000526570 FERMT1Q9BQL6 677 aa13.55□□□□□ -0.24
FGFR1-227ENST00000526570 DDX28Q9NUL7 540 aaKnown RBP13.55□□□□□ -0.24
FGFR1-227ENST00000526570 TRIM37O94972 964 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 PSMB7Q99436 277 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 COQ7Q99807 217 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 GAS8O95995 478 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 SLC8A3P57103 927 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 PIP4K2CQ8TBX8 421 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 TBC1D5Q92609 795 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 ASAP1Q9ULH1 1129 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 STXBP3O00186 592 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 CORO7P57737 925 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 KLHL7Q8IXQ5 586 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 WDR17Q8IZU2 1322 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 HNRNPH1P31943 449 aaKnown RBP13.54□□□□□ -0.24
FGFR1-227ENST00000526570 PSMC1P62191 440 aaKnown RBP13.54□□□□□ -0.24
FGFR1-227ENST00000526570 SCYL3Q8IZE3 742 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 STAMBPL1Q96FJ0 436 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 RILPQ96NA2 401 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 SYNMO15061 1565 aa13.54□□□□□ -0.24
FGFR1-227ENST00000526570 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 SIK1P57059 783 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
FGFR1-227ENST00000526570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-227ENST00000526570 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 UBA7P41226 1012 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 RNASELQ05823 741 aaKnown RBP13.53□□□□□ -0.24
FGFR1-227ENST00000526570 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 TMCO5AQ8N6Q1 288 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 LPIN2Q92539 896 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 IQGAP3Q86VI3 1631 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 MROH5Q6ZUA9 1318 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 PSMA7O14818 248 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 NANOGNBQ7Z5D8 188 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 TTC6Q86TZ1 520 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 ITGB1BP2Q9UKP3 347 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 DNAJC6O75061 913 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 CTSWP56202 376 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 SNX1Q13596 522 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
FGFR1-227ENST00000526570 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 ARHGAP31Q2M1Z3 1444 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
FGFR1-227ENST00000526570 ZRANB2O95218 330 aaKnown RBP eCLIP13.52□□□□□ -0.24
FGFR1-227ENST00000526570 CALM1P0DP23 149 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 CALM2P0DP24 149 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 CALM3P0DP25 149 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.24
FGFR1-227ENST00000526570 EIF6P56537 245 aaKnown RBP13.52□□□□□ -0.24
FGFR1-227ENST00000526570 NRBF2Q96F24 287 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 VPS16Q9H269 839 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 PARVBQ9HBI1 364 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 EXOC1Q9NV70 894 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 RXRAP19793 462 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 KCNA4P22459 653 aa13.52□□□□□ -0.24
FGFR1-227ENST00000526570 PMS1P54277 932 aaKnown RBP13.52□□□□□ -0.24
FGFR1-227ENST00000526570 NNTQ13423 1086 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms