RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 U2SURPO15042 1029 aaKnown RBP6.57□□□□□ -1.36
CSDE1-211ENST00000525970 IMPDH2P12268 514 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 EIF6P56537 245 aaKnown RBP6.57□□□□□ -1.36
CSDE1-211ENST00000525970 DLG4P78352 724 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 PTPROQ16827 1216 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 CDCP2Q5VXM1 449 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 LILRB2Q8N423 598 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 OR6P1Q8NGX9 317 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 CRBNQ96SW2 442 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 CNNM2Q9H8M5 875 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 KANSL2Q9H9L4 492 aa6.57□□□□□ -1.36
CSDE1-211ENST00000525970 TEX51A0A1B0GUA7 166 aa6.56□□□□□ -1.36
CSDE1-211ENST00000525970 POLR2BP30876 1174 aaKnown RBP6.56□□□□□ -1.36
CSDE1-211ENST00000525970 TEKQ02763 1124 aa6.56□□□□□ -1.36
CSDE1-211ENST00000525970 DDR2Q16832 855 aa6.56□□□□□ -1.36
CSDE1-211ENST00000525970 TIGD5Q53EQ6 642 aa6.56□□□□□ -1.36
CSDE1-211ENST00000525970 ZNF552Q9H707 407 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-211ENST00000525970 MYOCOSA0A1B0GUC4 107 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 FAM86C2PA6NEL3 165 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 LRRN2O75325 713 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 NME1P15531 152 aaKnown RBP6.55□□□□□ -1.36
CSDE1-211ENST00000525970 CASP7P55210 303 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 CTSWP56202 376 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 RASGRF1Q13972 1273 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 ZNF605Q86T29 641 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 JMYQ8N9B5 988 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 ENOX1Q8TC92 643 aaKnown RBP6.55□□□□□ -1.36
CSDE1-211ENST00000525970 SH3TC2Q8TF17 1288 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.363e-6■■□□□ 12
CSDE1-211ENST00000525970 IRF2BPLQ9H1B7 796 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 ACTR10Q9NZ32 417 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 ZNF281Q9Y2X9 895 aa6.55□□□□□ -1.36
CSDE1-211ENST00000525970 MEIS3P2A8K0S8 358 aa6.54□□□□□ -1.36
CSDE1-211ENST00000525970 UBOX5O94941 541 aa6.54□□□□□ -1.36
CSDE1-211ENST00000525970 CLSTN1O94985 981 aa6.54□□□□□ -1.36
CSDE1-211ENST00000525970 LSRQ86X29 649 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-211ENST00000525970 LINC01599Q8WXQ3 324 aa6.54□□□□□ -1.36
CSDE1-211ENST00000525970 DNAJC7Q99615 494 aa6.54□□□□□ -1.36
CSDE1-211ENST00000525970 GPR160Q9UJ42 338 aa6.54□□□□□ -1.36
CSDE1-211ENST00000525970 R3HCC1Q9Y3T6 440 aaKnown RBP6.54□□□□□ -1.36
CSDE1-211ENST00000525970 HRKO00198 91 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 PDPK1O15530 556 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 CLEC3AO75596 197 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 HOXA5P20719 270 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 PDE6BP35913 854 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 CCNFP41002 786 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 CLEC16AQ2KHT3 1053 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 ZNF385BQ569K4 471 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 TMEM132EQ6IEE7 984 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 RNF111Q6ZNA4 994 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 KIAA0907Q7Z7F0 614 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-211ENST00000525970 C19orf47Q8N9M1 422 aaKnown RBP6.53□□□□□ -1.36
CSDE1-211ENST00000525970 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 SHISA4Q96DD7 197 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 TM9SF2Q99805 663 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 ASCC2Q9H1I8 757 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-211ENST00000525970 PARD6AQ9NPB6 346 aa6.53□□□□□ -1.36
CSDE1-211ENST00000525970 RFXAPO00287 272 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 TNFRSF10CO14798 259 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 RNF4P78317 190 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 RNF187Q5TA31 235 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-211ENST00000525970 INTS3Q68E01 1043 aaKnown RBP6.52□□□□□ -1.37
CSDE1-211ENST00000525970 RUFY4Q6ZNE9 571 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 TMEM151BQ8IW70 566 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 SYTL5Q8TDW5 730 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-211ENST00000525970 SLC6A18Q96N87 628 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 G6PC3Q9BUM1 346 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 FANCLQ9NW38 375 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 IFT57Q9NWB7 429 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 TMEM260Q9NX78 707 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 EBF1Q9UH73 591 aa6.52□□□□□ -1.37
CSDE1-211ENST00000525970 CNOT6Q9ULM6 557 aaKnown RBP6.52□□□□□ -1.37
CSDE1-211ENST00000525970 NOP58Q9Y2X3 529 aaKnown RBP6.52□□□□□ -1.37
CSDE1-211ENST00000525970 SHISA3A0PJX4 238 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 OR14I1A6ND48 311 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 RAB11FIP3O75154 756 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 CDC45O75419 566 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 GUCY2CP25092 1073 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 SQSTM1Q13501 440 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 TCERG1LQ5VWI1 586 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 TMEM192Q8IY95 271 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 VWCEQ96DN2 955 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 ZNF512BQ96KM6 892 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-211ENST00000525970 DHRS1Q96LJ7 313 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 TMX1Q9H3N1 280 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 GCM1Q9NP62 436 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 ST7Q9NRC1 585 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 PRKAB1Q9Y478 270 aa6.51□□□□□ -1.37
CSDE1-211ENST00000525970 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 ESYT3A0FGR9 886 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 CCDC85CA6NKD9 419 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 PSPNO60542 156 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 ACRP10323 421 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 BUD31P41223 144 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-211ENST00000525970 IGBP1P78318 339 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 NMIQ13287 307 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-211ENST00000525970 FXNQ16595 210 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms