RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MBD1Q9UIS9 605 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-208ENST00000524652 CNOT6Q9ULM6 557 aaKnown RBP4.9□□□□□ -1.63
CSDE1-208ENST00000524652 WTIPA6NIX2 430 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-208ENST00000524652 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 ABLIM1O14639 778 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 ZNF76P36508 570 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 CTSKP43235 329 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 ERVFRD-1P60508 538 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 ZNF385BQ569K4 471 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 GALNT18Q6P9A2 607 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 ZPBP2Q6X784 338 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 SMARCC1Q92922 1105 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-208ENST00000524652 PLCD4Q9BRC7 762 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 GFOD1Q9NXC2 390 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 FBXL21Q9UKT6 434 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 GPR55Q9Y2T6 319 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-208ENST00000524652 TAF6LQ9Y6J9 622 aa4.89□□□□□ -1.63
CSDE1-208ENST00000524652 TDRD9Q8NDG6 1382 aaKnown RBP4.89□□□□□ -1.63
CSDE1-208ENST00000524652 A0A1W2PQ45 241 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-208ENST00000524652 A0A1W2PQY0 241 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 SHOXO15266 292 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 INHBBP09529 407 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 ACRP10323 421 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 ARL4AP40617 200 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 YBX1P67809 324 aaKnown RBP4.88□□□□□ -1.63
CSDE1-208ENST00000524652 SRSF3P84103 164 aaKnown RBP4.88□□□□□ -1.63
CSDE1-208ENST00000524652 FANCCQ00597 558 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 TMEM62Q0P6H9 643 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 HSF5Q4G112 596 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-208ENST00000524652 TCERG1LQ5VWI1 586 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 SLCO6A1Q86UG4 719 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 USP48Q86UV5 1035 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 TMEM151BQ8IW70 566 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 C7orf61Q8IZ16 206 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 SIGLEC10Q96LC7 697 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 TM9SF2Q99805 663 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 CDADC1Q9BWV3 514 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 SGPP1Q9BX95 441 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 SIRT5Q9NXA8 310 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 MINPP1Q9UNW1 487 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 KCTD3Q9Y597 815 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 GAPVD1Q14C86 1478 aa4.88□□□□□ -1.63
CSDE1-208ENST00000524652 ADAMTS12P58397 1594 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 MEIS1O00470 390 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 N4BP3O15049 544 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 MPOP05164 745 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 GSNP06396 782 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 VAV1P15498 845 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 VIPR1P32241 457 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 PMS1P54277 932 aaKnown RBP4.87□□□□□ -1.63
CSDE1-208ENST00000524652 LAPTM5Q13571 262 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 CRTC3Q6UUV7 619 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 DSCC1Q9BVC3 393 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 SNAPC4Q5SXM2 1469 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 ERICH3Q5RHP9 1530 aa4.87□□□□□ -1.63
CSDE1-208ENST00000524652 C9IYK1 514 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 CEBPAP49715 358 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-208ENST00000524652 SSPNQ14714 243 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 ANKRD39Q53RE8 183 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 CCDC144CPQ8IYA2 1237 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 RBBP8NLQ8NC74 664 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-208ENST00000524652 FERD3LQ96RJ6 166 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 BACH2Q9BYV9 841 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 TNFRSF12AQ9NP84 129 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 AP5S1Q9NUS5 200 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 ACSL6Q9UKU0 697 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 IRAK3Q9Y616 596 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 CUL7Q14999 1698 aa4.86□□□□□ -1.63
CSDE1-208ENST00000524652 IRS4O14654 1257 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-208ENST00000524652 PRKCAP17252 672 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 GUCY2CP25092 1073 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 CTSWP56202 376 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 ZNF394Q53GI3 561 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 RTP2Q5QGT7 225 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 TMCO4Q5TGY1 634 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 CWF19L1Q69YN2 538 aaKnown RBP4.85□□□□□ -1.63
CSDE1-208ENST00000524652 CYP2R1Q6VVX0 501 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 SRRTQ9BXP5 876 aaKnown RBP4.85□□□□□ -1.63
CSDE1-208ENST00000524652 CNTD2Q9H8S5 307 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 PARD6AQ9NPB6 346 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 NCANO14594 1321 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 GRIN2BQ13224 1484 aa4.85□□□□□ -1.63
CSDE1-208ENST00000524652 FAM86C2PA6NEL3 165 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 PI3P19957 117 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 SDHBP21912 280 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 EPHB3P54753 998 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 CYP4F8P98187 520 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 COL9A2Q14055 689 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-208ENST00000524652 KIR3DS1Q14943 382 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 PPFIBP1Q86W92 1011 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 NAT16Q8N8M0 369 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 NUP43Q8NFH3 380 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 RNF34Q969K3 372 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 KCNC2Q96PR1 638 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 SLC12A9Q9BXP2 914 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 KLHL14Q9P2G3 628 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 PCDHGB7Q9Y5F8 929 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 FHOD1Q9Y613 1164 aa4.84□□□□□ -1.63
CSDE1-208ENST00000524652 CTTNBP2Q8WZ74 1663 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 CEP170Q5SW79 1584 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms