RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 CCDC12Q8WUD4 166 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-216ENST00000524481 PAGE5Q96GU1 130 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 SKILP12757 684 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 POLD1P28340 1107 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 MYL5Q02045 173 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 TBC1D10BQ4KMP7 808 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-216ENST00000524481 ZDHHC15Q96MV8 337 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 PSTPIP2Q9H939 334 aa13.32□□□□□ -0.28
PTPRK-216ENST00000524481 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
PTPRK-216ENST00000524481 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPRK-216ENST00000524481 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 POTEDQ86YR6 584 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 CPXCR1Q8N123 301 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 ACER1Q8TDN7 264 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 HPS3Q969F9 1004 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 JMJD4Q9H9V9 463 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 NEMFO60524 1076 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 ADCY7P51828 1080 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 JAG1P78504 1218 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 CHD4Q14839 1912 aa13.31□□□□□ -0.28
PTPRK-216ENST00000524481 POTEMA6NI47 508 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 NEK8Q86SG6 692 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 HOMER2Q9NSB8 354 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 CFBP00751 764 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 ZNF76P36508 570 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 CTNND2Q9UQB3 1225 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 GDAQ9Y2T3 454 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-216ENST00000524481 CXCL9Q07325 125 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 ZNF543Q08ER8 600 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 DGKZQ13574 1117 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 KANSL2Q9H9L4 492 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
PTPRK-216ENST00000524481 MYO1BO43795 1136 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 CAVIN2O95810 425 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 EGFRP00533 1210 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 GABPAQ06546 454 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 SUPT20HQ8NEM7 779 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 TBC1D7Q9P0N9 293 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 ACTN4O43707 911 aaKnown RBP13.29□□□□□ -0.28
PTPRK-216ENST00000524481 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 QRICH1Q2TAL8 776 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
PTPRK-216ENST00000524481 VPS16Q9H269 839 aa13.29□□□□□ -0.28
PTPRK-216ENST00000524481 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 RRP1BQ14684 758 aaKnown RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 CALCRLQ16602 461 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 HS1BP3Q53T59 392 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 CABP7Q86V35 215 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 TIGD1Q96MW7 591 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 DHX36Q9H2U1 1008 aaKnown RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 RREB1Q92766 1687 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.284e-7■□□□□ 11
PTPRK-216ENST00000524481 ADKP55263 362 aaKnown RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 ASIC1P78348 528 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 RASSF7Q02833 373 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 KANK3Q6NY19 840 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 PLA2G4DQ86XP0 818 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 RTKN2Q8IZC4 609 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 TNFRSF25Q93038 417 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 LRWD1Q9UFC0 647 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 BMP15O95972 392 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 CDC37Q16543 378 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 ASPRV1Q53RT3 343 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 KRT25Q7Z3Z0 450 aa13.28□□□□□ -0.28
PTPRK-216ENST00000524481 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-216ENST00000524481 LY75O60449 1722 aa13.27□□□□□ -0.28
PTPRK-216ENST00000524481 NDUFB10O96000 172 aa13.27□□□□□ -0.28
PTPRK-216ENST00000524481 OR52Z1P0C646 297 aa13.27□□□□□ -0.28
PTPRK-216ENST00000524481 MRPL12P52815 198 aaKnown RBP13.27□□□□□ -0.28
PTPRK-216ENST00000524481 FAM83BQ5T0W9 1011 aa13.27□□□□□ -0.28
PTPRK-216ENST00000524481 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.28
PTPRK-216ENST00000524481 CCDC17Q96LX7 622 aa13.27□□□□□ -0.28
PTPRK-216ENST00000524481 PCMTD1Q96MG8 357 aaPredicted RBP13.27□□□□□ -0.28
PTPRK-216ENST00000524481 SPZ1Q9BXG8 430 aa13.27□□□□□ -0.28
PTPRK-216ENST00000524481 ZNF70Q9UC06 446 aaPredicted RBP13.27□□□□□ -0.28
PTPRK-216ENST00000524481 ASTN2O75129 1339 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-216ENST00000524481 A0A1W2PRG0 241 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 TRIM49BA6NDI0 452 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 SLC37A4O43826 429 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 PPP1R11O60927 126 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-216ENST00000524481 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
PTPRK-216ENST00000524481 PLCG1P19174 1290 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 PRR16Q569H4 304 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 ZMYND12Q9H0C1 365 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 TAOK3Q9H2K8 898 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 SERPINA10Q9UK55 444 aa13.27□□□□□ -0.29
PTPRK-216ENST00000524481 PNMA6FA0A0J9YX94 578 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms