RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.03□□□□□ -0.16
SPARC-206ENST00000524277 ZHX1Q9UKY1 873 aaPredicted RBP14.03□□□□□ -0.16
SPARC-206ENST00000524277 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPARC-206ENST00000524277 SALL3Q9BXA9 1300 aa14.03□□□□□ -0.16
SPARC-206ENST00000524277 PLXNA1Q9UIW2 1896 aa14.02□□□□□ -0.16
SPARC-206ENST00000524277 SYNRGQ9UMZ2 1314 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 TRIM43BA6NCK2 446 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 ASB14A6NK59 587 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 ORC4O43929 436 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 RAG1P15918 1043 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 GJA9P57773 515 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 SMAD3P84022 425 aaKnown RBP14.02□□□□□ -0.17
SPARC-206ENST00000524277 IKQ13123 557 aaPredicted RBP14.02□□□□□ -0.17
SPARC-206ENST00000524277 ZNF697Q5TEC3 545 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 OTUD7AQ8TE49 926 aaPredicted RBP14.02□□□□□ -0.17
SPARC-206ENST00000524277 TRIM43Q96BQ3 446 aaPredicted RBP14.02□□□□□ -0.17
SPARC-206ENST00000524277 SEZ6LQ9BYH1 1024 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 UPF3AQ9H1J1 476 aaKnown RBP14.02□□□□□ -0.17
SPARC-206ENST00000524277 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 PNMA2Q9UL42 364 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 COL6A3P12111 3177 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
SPARC-206ENST00000524277 FGRP09769 529 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 MCCP23508 829 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 NOVP48745 357 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 NT5C2P49902 561 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 PDE1AP54750 535 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 NKX3-2P78367 333 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 SHHQ15465 462 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 KCNA10Q16322 511 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 CCDC144BQ3MJ40 725 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
SPARC-206ENST00000524277 CCDC174Q6PII3 467 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 ARMCX2Q7L311 632 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 SH3RF1Q7Z6J0 888 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
SPARC-206ENST00000524277 ISY1Q9ULR0 285 aaKnown RBP14.01□□□□□ -0.17
SPARC-206ENST00000524277 TMEM265A0A087WTH1 108 aa14□□□□□ -0.17
SPARC-206ENST00000524277 LOC102724159A0A0B4J2E5 919 aa14□□□□□ -0.17
SPARC-206ENST00000524277 RANBP6O60518 1105 aaKnown RBP14□□□□□ -0.17
SPARC-206ENST00000524277 PQBP1O60828 265 aaKnown RBP14□□□□□ -0.17
SPARC-206ENST00000524277 C6orf222P0C671 652 aaPredicted RBP14□□□□□ -0.17
SPARC-206ENST00000524277 PCP11498 1178 aaKnown RBP14□□□□□ -0.17
SPARC-206ENST00000524277 PWP2Q15269 919 aaKnown RBP14□□□□□ -0.17
SPARC-206ENST00000524277 MCMDC2Q4G0Z9 681 aa14□□□□□ -0.17
SPARC-206ENST00000524277 CCDC144CPQ8IYA2 1237 aa14□□□□□ -0.17
SPARC-206ENST00000524277 FAM133AQ8N9E0 248 aa14□□□□□ -0.17
SPARC-206ENST00000524277 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
SPARC-206ENST00000524277 RNF146Q9NTX7 359 aa14□□□□□ -0.17
SPARC-206ENST00000524277 TCP11L1Q9NUJ3 509 aa14□□□□□ -0.17
SPARC-206ENST00000524277 A0A0C4DFX4 3053 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 ZNF536O15090 1300 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 ZMYM6O95789 1325 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 A0A0U1RQG5 324 aaPredicted RBP13.99□□□□□ -0.17
SPARC-206ENST00000524277 DLL1O00548 723 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 CABYRO75952 493 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 ASGR1P07306 291 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 CDK7P50613 346 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 MFAP1P55081 439 aaKnown RBP13.99□□□□□ -0.17
SPARC-206ENST00000524277 FPGSQ05932 587 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 CTDSPL2Q05D32 466 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 FAAP100Q0VG06 881 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 GNASQ5JWF2 1037 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 C9orf50Q5SZB4 431 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 CCDC129Q6ZRS4 1044 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 VTI1AQ96AJ9 217 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 FGD4Q96M96 766 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 TTC14Q96N46 770 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
SPARC-206ENST00000524277 IL17RBQ9NRM6 502 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 Q9Y3F1 56 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 LTBP2Q14767 1821 aa13.99□□□□□ -0.17
SPARC-206ENST00000524277 ARVCFO00192 962 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 FOXP2O15409 715 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 TLR3O15455 904 aaKnown RBP13.98□□□□□ -0.17
SPARC-206ENST00000524277 ZEB2O60315 1214 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 TIMP1P01033 207 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 FGAP02671 866 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
SPARC-206ENST00000524277 ALAS1P13196 640 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 TNFAIP2Q03169 654 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 IQSEC1Q6DN90 963 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 BTNL9Q6UXG8 535 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 KCTD1Q719H9 257 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 LENG1Q96BZ8 264 aaPredicted RBP13.98□□□□□ -0.17
SPARC-206ENST00000524277 AGBL1Q96MI9 1066 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 KATNBL1Q9H079 304 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
SPARC-206ENST00000524277 ICAM1P05362 532 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 CNTN2Q02246 1040 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 PPIGQ13427 754 aaKnown RBP eCLIP13.97□□□□□ -0.17
SPARC-206ENST00000524277 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 MFSD5Q6N075 450 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 RNPC3Q96LT9 517 aaKnown RBP13.97□□□□□ -0.17
SPARC-206ENST00000524277 GUCD1Q96NT3 240 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 CRBNQ96SW2 442 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 SEMA6BQ9H3T3 888 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms