RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CCDC96Q2M329 555 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 PRAMEF19Q5SWL8 479 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 TRPV1Q8NER1 839 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 SENP6Q9GZR1 1112 aaPredicted RBP20.26■□□□□ 0.83
CCNC-213ENST00000523541 ACAD9Q9H845 621 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 ZSWIM5Q9P217 1185 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 ZMYND8Q9ULU4 1186 aaPredicted RBP20.26■□□□□ 0.83
CCNC-213ENST00000523541 CEP290O15078 2479 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 ZNF536O15090 1300 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 NEDD4P46934 1319 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 PDHBP11177 359 aa20.25■□□□□ 0.83
CCNC-213ENST00000523541 TRDNQ13061 729 aa20.25■□□□□ 0.83
CCNC-213ENST00000523541 ZSCAN10Q96SZ4 725 aaPredicted RBP20.25■□□□□ 0.83
CCNC-213ENST00000523541 MAF1Q9H063 256 aa20.25■□□□□ 0.83
CCNC-213ENST00000523541 RANBP17Q9H2T7 1088 aaKnown RBP20.25■□□□□ 0.83
CCNC-213ENST00000523541 HOMER2Q9NSB8 354 aa20.25■□□□□ 0.83
CCNC-213ENST00000523541 CNPY2Q9Y2B0 182 aa20.25■□□□□ 0.83
CCNC-213ENST00000523541 KBTBD13C9JR72 458 aa20.24■□□□□ 0.83
CCNC-213ENST00000523541 DNM1LO00429 736 aa20.24■□□□□ 0.83
CCNC-213ENST00000523541 ICAM1P05362 532 aa20.24■□□□□ 0.83
CCNC-213ENST00000523541 ZNF543Q08ER8 600 aa20.24■□□□□ 0.83
CCNC-213ENST00000523541 SYDE2Q5VT97 1194 aa20.24■□□□□ 0.83
CCNC-213ENST00000523541 IL25Q9H293 177 aa20.24■□□□□ 0.83
CCNC-213ENST00000523541 PFASO15067 1338 aa20.24■□□□□ 0.83
CCNC-213ENST00000523541 B4E1Z4 1266 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 SYN1P17600 705 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 GJC2Q5T442 439 aaPredicted RBP20.23■□□□□ 0.83
CCNC-213ENST00000523541 MAP4K1Q92918 833 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 AGBL1Q96MI9 1066 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 TRERF1Q96PN7 1200 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 UBAC1Q9BSL1 405 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 KAT14Q9H8E8 782 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 RBM27Q9P2N5 1060 aaKnown RBP20.23■□□□□ 0.83
CCNC-213ENST00000523541 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
CCNC-213ENST00000523541 FRMPD3Q5JV73 1810 aa20.23■□□□□ 0.83
CCNC-213ENST00000523541 ATN1P54259 1190 aaPredicted RBP20.22■□□□□ 0.83
CCNC-213ENST00000523541 CCDC174Q6PII3 467 aa20.22■□□□□ 0.83
CCNC-213ENST00000523541 PNMA1Q8ND90 353 aa20.22■□□□□ 0.83
CCNC-213ENST00000523541 RNF146Q9NTX7 359 aa20.22■□□□□ 0.83
CCNC-213ENST00000523541 LOC102724159A0A0B4J2E5 919 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 POTEB2H3BUK9 544 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 ZNF865P0CJ78 1059 aaPredicted RBP20.21■□□□□ 0.83
CCNC-213ENST00000523541 RARBP10826 455 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 AKR1A1P14550 325 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 PWP2Q15269 919 aaKnown RBP20.21■□□□□ 0.83
CCNC-213ENST00000523541 BMP2KLQ5H9B9 411 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 TTBK2Q6IQ55 1244 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 KIAA1211Q6ZU35 1233 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 ENAHQ8N8S7 591 aaPredicted RBP20.21■□□□□ 0.83
CCNC-213ENST00000523541 FAM133AQ8N9E0 248 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 ZKSCAN3Q9BRR0 538 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 ABHD16BQ9H3Z7 469 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 GPCPD1Q9NPB8 672 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 CCPG1Q9ULG6 757 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 ALPK3Q96L96 1907 aa20.21■□□□□ 0.83
CCNC-213ENST00000523541 PLXNA1Q9UIW2 1896 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 ASB14A6NK59 587 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 SNAI1O95863 264 aaPredicted RBP20.2■□□□□ 0.82
CCNC-213ENST00000523541 CYP21A2P08686 494 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 ALAS1P13196 640 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 SLC16A2P36021 539 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 PTH1RQ03431 593 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 LRRC26Q2I0M4 334 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 ASPRV1Q53RT3 343 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 A1CFQ9NQ94 594 aaKnown RBP20.2■□□□□ 0.82
CCNC-213ENST00000523541 ZHX1Q9UKY1 873 aaPredicted RBP20.2■□□□□ 0.82
CCNC-213ENST00000523541 FAM184BQ9ULE4 1060 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 WDR19Q8NEZ3 1342 aa20.2■□□□□ 0.82
CCNC-213ENST00000523541 SNAP25P60880 206 aa20.19■□□□□ 0.82
CCNC-213ENST00000523541 IFIT1BQ5T764 474 aaKnown RBP20.19■□□□□ 0.82
CCNC-213ENST00000523541 RASGRP2Q7LDG7 609 aa20.19■□□□□ 0.82
CCNC-213ENST00000523541 XPNPEP3Q9NQH7 507 aa20.19■□□□□ 0.82
CCNC-213ENST00000523541 TNKSO95271 1327 aa20.19■□□□□ 0.82
CCNC-213ENST00000523541 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
CCNC-213ENST00000523541 FXR1P51114 621 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCNC-213ENST00000523541 ACVR2BQ13705 512 aa20.18■□□□□ 0.82
CCNC-213ENST00000523541 RNF180Q86T96 592 aa20.18■□□□□ 0.82
CCNC-213ENST00000523541 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
CCNC-213ENST00000523541 NCOA7Q8NI08 942 aa20.18■□□□□ 0.82
CCNC-213ENST00000523541 CYP39A1Q9NYL5 469 aa20.18■□□□□ 0.82
CCNC-213ENST00000523541 PRKAG2Q9UGJ0 569 aa20.18■□□□□ 0.82
CCNC-213ENST00000523541 FRMPD2Q68DX3 1309 aaPredicted RBP20.18■□□□□ 0.82
CCNC-213ENST00000523541 ERICH2A1L162 156 aa20.17■□□□□ 0.82
CCNC-213ENST00000523541 TAL1P17542 331 aaPredicted RBP20.17■□□□□ 0.82
CCNC-213ENST00000523541 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
CCNC-213ENST00000523541 SEC23AQ15436 765 aa20.17■□□□□ 0.82
CCNC-213ENST00000523541 RALYLQ86SE5 291 aaKnown RBP20.17■□□□□ 0.82
CCNC-213ENST00000523541 FERMT2Q96AC1 680 aa20.17■□□□□ 0.82
CCNC-213ENST00000523541 TSEN34Q9BSV6 310 aaKnown RBP20.17■□□□□ 0.82
CCNC-213ENST00000523541 MTA3Q9BTC8 594 aa20.17■□□□□ 0.82
CCNC-213ENST00000523541 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.17■□□□□ 0.82
CCNC-213ENST00000523541 ADD3Q9UEY8 706 aaKnown RBP20.17■□□□□ 0.82
CCNC-213ENST00000523541 ATP11BQ9Y2G3 1177 aa20.17■□□□□ 0.82
CCNC-213ENST00000523541 E7EWF7 191 aa20.16■□□□□ 0.82
CCNC-213ENST00000523541 DUSP11O75319 330 aaKnown RBP20.16■□□□□ 0.82
CCNC-213ENST00000523541 PARP1P09874 1014 aaKnown RBP20.16■□□□□ 0.82
CCNC-213ENST00000523541 ADCYAP1R1P41586 468 aa20.16■□□□□ 0.82
CCNC-213ENST00000523541 LRRC41Q15345 812 aa20.16■□□□□ 0.82
CCNC-213ENST00000523541 C1orf53Q5VUE5 145 aa20.16■□□□□ 0.82
CCNC-213ENST00000523541 ARMCX2Q7L311 632 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms