RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CCDC50Q8IVM0 306 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 ELOA2Q8IYF1 753 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 CACNA2D3Q8IZS8 1091 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 MSL3Q8N5Y2 521 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 ANKS4BQ8N8V4 417 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 SPATA5Q8NB90 893 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 IGDCC4Q8TDY8 1250 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 CNOT6LQ96LI5 555 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 KRT12Q99456 494 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 NLRC4Q9NPP4 1024 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 PPP1R3GB7ZBB8 358 aa10.02□□□□□ -0.8
CSMD1-212ENST00000523387 RPSAP08865 295 aaKnown RBP10.02□□□□□ -0.8
CSMD1-212ENST00000523387 AARSP49588 968 aaKnown RBP eCLIP10.02□□□□□ -0.8
CSMD1-212ENST00000523387 DPYDQ12882 1025 aa10.02□□□□□ -0.8
CSMD1-212ENST00000523387 KRT26Q7Z3Y9 468 aa10.02□□□□□ -0.8
CSMD1-212ENST00000523387 STRBPQ96SI9 672 aaKnown RBP10.02□□□□□ -0.8
CSMD1-212ENST00000523387 ATG3Q9NT62 314 aa10.02□□□□□ -0.8
CSMD1-212ENST00000523387 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 CTNNA1P35221 906 aaKnown RBP10.02□□□□□ -0.81
CSMD1-212ENST00000523387 SARSP49591 514 aaKnown RBP10.02□□□□□ -0.81
CSMD1-212ENST00000523387 MDM2Q00987 491 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-212ENST00000523387 RASSF7Q02833 373 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 PPP2R5AQ15172 486 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 CDKAL1Q5VV42 579 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 RUFY4Q6ZNE9 571 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 SPATA4Q8NEY3 305 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 LRRC45Q96CN5 670 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 RRP36Q96EU6 259 aaKnown RBP10.02□□□□□ -0.81
CSMD1-212ENST00000523387 BMP2KQ9NSY1 1161 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-212ENST00000523387 SMARCAL1Q9NZC9 954 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 SUFUQ9UMX1 484 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 BUB1BO60566 1050 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-212ENST00000523387 KRT14P02533 472 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 ATF3P18847 181 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 PPP2R5BQ15173 497 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 FBXL16Q8N461 479 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 CABLES1Q8TDN4 633 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 RIPOR2Q9Y4F9 1068 aa10.02□□□□□ -0.81
CSMD1-212ENST00000523387 EIF4A3P38919 411 aaKnown RBP10.01□□□□□ -0.81
CSMD1-212ENST00000523387 TCIRG1Q13488 830 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 RAPGEF1Q13905 1077 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 PTPROQ16827 1216 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 KRT71Q3SY84 523 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 FAM212AQ96EL1 285 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 SPAG5Q96R06 1193 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 PRDM11Q9NQV5 511 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 FAM237AA0A1B0GTK4 181 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 NCK2O43639 380 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 CEP104O60308 925 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 PUM3Q15397 648 aaKnown RBP10.01□□□□□ -0.81
CSMD1-212ENST00000523387 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 SDR42E1Q8WUS8 393 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 ARL8AQ96BM9 186 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 TBC1D31Q96DN5 1066 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 AGPAT5Q9NUQ2 364 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 SEPT11Q9NVA2 429 aaKnown RBP10.01□□□□□ -0.81
CSMD1-212ENST00000523387 TSKSQ9UJT2 592 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 SNX12Q9UMY4 172 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 PCDHA13Q9Y5I0 950 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 PPP1R7Q15435 360 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 EZH2Q15910 746 aaKnown RBP10.01□□□□□ -0.81
CSMD1-212ENST00000523387 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 OSBPL9Q96SU4 736 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 TRIM31Q9BZY9 425 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 DMGDHQ9UI17 866 aaKnown RBP10.01□□□□□ -0.81
CSMD1-212ENST00000523387 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
CSMD1-212ENST00000523387 KIF11P52732 1056 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 EHHADHQ08426 723 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 SLC9C1Q4G0N8 1177 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 CCDC84Q86UT8 332 aaPredicted RBP10□□□□□ -0.81
CSMD1-212ENST00000523387 LACRTQ9GZZ8 138 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 NBPF3Q9H094 633 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 GREM2Q9H772 168 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 CD248Q9HCU0 757 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 KLC4Q9NSK0 619 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 CAPN11Q9UMQ6 739 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 DUSP10Q9Y6W6 482 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 SEC24CP53992 1094 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 GKAP1Q5VSY0 366 aaPredicted RBP10□□□□□ -0.81
CSMD1-212ENST00000523387 AXIN2Q9Y2T1 843 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 RAD21O60216 631 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 PPP1R37O75864 691 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 PLEKHA8P1O95397 391 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 FTCDO95954 541 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 NTRK3Q16288 839 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 LRCH2Q5VUJ6 765 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 CNNM4Q6P4Q7 775 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 NLRP14Q86W24 1093 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 LPIN2Q92539 896 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 THAP9Q9H5L6 903 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 MKNK2Q9HBH9 465 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 SEC31BQ9NQW1 1179 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 SAMD15Q9P1V8 674 aa10□□□□□ -0.81
CSMD1-212ENST00000523387 XRN1Q8IZH2 1706 aaKnown RBP10□□□□□ -0.81
CSMD1-212ENST00000523387 VIMP08670 466 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 MYBL2P10244 700 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 LSP1P33241 339 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 LETM2Q2VYF4 491 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms