RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ANXA1P04083 346 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 SREBF2Q12772 1141 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 NBPF9Q3BBW0 867 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 LDLRAD1Q5T700 205 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 TMC4Q7Z404 712 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 TREML1Q86YW5 311 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 CD99L2Q8TCZ2 262 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 RTF1Q92541 710 aaKnown RBP8.76□□□□□ -1.01
SDCBP-210ENST00000522843 ZNF333Q96JL9 665 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 MYOZ2Q9NPC6 264 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 FZD1Q9UP38 647 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 LAMB1P07942 1786 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 UNC80Q8N2C7 3258 aa8.76□□□□□ -1.01
SDCBP-210ENST00000522843 ZNF646O15015 1829 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-210ENST00000522843 HTATSF1O43719 755 aaKnown RBP8.75□□□□□ -1.01
SDCBP-210ENST00000522843 ZDHHC13Q8IUH4 622 aa8.75□□□□□ -1.01
SDCBP-210ENST00000522843 HOMEZQ8IX15 550 aa8.75□□□□□ -1.01
SDCBP-210ENST00000522843 ARMC10Q8N2F6 343 aa8.75□□□□□ -1.01
SDCBP-210ENST00000522843 GALNT11Q8NCW6 608 aa8.75□□□□□ -1.01
SDCBP-210ENST00000522843 AGBL3Q8NEM8 1001 aa8.75□□□□□ -1.01
SDCBP-210ENST00000522843 CEP41Q9BYV8 373 aa8.75□□□□□ -1.01
SDCBP-210ENST00000522843 NOVA2Q9UNW9 492 aaKnown RBP8.75□□□□□ -1.01
SDCBP-210ENST00000522843 RNF114Q9Y508 228 aa8.75□□□□□ -1.01
SDCBP-210ENST00000522843 VCANP13611 3396 aa8.74□□□□□ -1.01
SDCBP-210ENST00000522843 SOX1O00570 391 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-210ENST00000522843 GRIK1P39086 918 aa8.74□□□□□ -1.01
SDCBP-210ENST00000522843 NFIAQ12857 509 aa8.74□□□□□ -1.01
SDCBP-210ENST00000522843 PRKG1Q13976 671 aa8.74□□□□□ -1.01
SDCBP-210ENST00000522843 TRMT112Q9UI30 125 aaKnown RBP8.74□□□□□ -1.01
SDCBP-210ENST00000522843 SH3TC1Q8TE82 1336 aa8.74□□□□□ -1.01
SDCBP-210ENST00000522843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-210ENST00000522843 WTIPA6NIX2 430 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-210ENST00000522843 LINC01387J3KSC0 135 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 CRHR2Q13324 411 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 CNGB1Q14028 1251 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-210ENST00000522843 SF3B3Q15393 1217 aaKnown RBP8.73□□□□□ -1.01
SDCBP-210ENST00000522843 UVSSAQ2YD98 709 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 EYA3Q99504 573 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 MXD3Q9BW11 206 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 PODXL2Q9NZ53 605 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 ZMIZ1Q9ULJ6 1067 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 DLG5Q8TDM6 1919 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 SPTBN5Q9NRC6 3674 aaKnown RBP8.73□□□□□ -1.01
SDCBP-210ENST00000522843 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
SDCBP-210ENST00000522843 WNT10BO00744 389 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 SPINK2P20155 84 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 CD68P34810 354 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-210ENST00000522843 TCIRG1Q13488 830 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 CCER1Q8TC90 406 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-210ENST00000522843 SHISA4Q96DD7 197 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 ERO1AQ96HE7 468 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 CLMNQ96JQ2 1002 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 PRIMPOLQ96LW4 560 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 PTPN18Q99952 460 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 ZC3H12CQ9C0D7 883 aaKnown RBP8.72□□□□□ -1.01
SDCBP-210ENST00000522843 PTCH2Q9Y6C5 1203 aa8.72□□□□□ -1.01
SDCBP-210ENST00000522843 MANSC4A6NHS7 340 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-210ENST00000522843 ADAMTS4O75173 837 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 UFL1O94874 794 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 SASH1O94885 1247 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 WISP1O95388 367 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 U2AF1L5P0DN76 240 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-210ENST00000522843 U2AF1Q01081 240 aaKnown RBP eCLIP8.71□□□□□ -1.02
SDCBP-210ENST00000522843 COX20Q5RI15 118 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 RNF43Q68DV7 783 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 ACAD11Q709F0 780 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 COPS6Q7L5N1 327 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 PNISRQ8TF01 805 aaKnown RBP8.71□□□□□ -1.02
SDCBP-210ENST00000522843 XAGE3Q8WTP9 111 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 UTP4Q969X6 686 aaKnown RBP8.71□□□□□ -1.02
SDCBP-210ENST00000522843 FAM89AQ96GI7 184 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 WNK4Q96J92 1243 aa8.71□□□□□ -1.02
SDCBP-210ENST00000522843 ANGEL1Q9UNK9 670 aaKnown RBP8.71□□□□□ -1.02
SDCBP-210ENST00000522843 ZSWIM8A7E2V4 1837 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 EIF2S2P20042 333 aaKnown RBP8.7□□□□□ -1.02
SDCBP-210ENST00000522843 RPS8P62241 208 aaKnown RBP8.7□□□□□ -1.02
SDCBP-210ENST00000522843 SP3Q02447 781 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 AIMP1Q12904 312 aaKnown RBP8.7□□□□□ -1.02
SDCBP-210ENST00000522843 MAP3K11Q16584 847 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 HSP90AB3PQ58FF7 597 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 DACT2Q5SW24 774 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 ARMC9Q7Z3E5 817 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 UBE2Q1Q7Z7E8 422 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 DTX1Q86Y01 620 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 TRIM42Q8IWZ5 723 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 STK32AQ8WU08 396 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
SDCBP-210ENST00000522843 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 SEC31BQ9NQW1 1179 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 KCNK4Q9NYG8 393 aa8.7□□□□□ -1.02
SDCBP-210ENST00000522843 HMX2A2RU54 273 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 PRR19A6NJB7 356 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 PRMT3O60678 531 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 ZBTB48P10074 688 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-210ENST00000522843 INHBEP58166 350 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 FKBP5Q13451 457 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-210ENST00000522843 ELOAQ14241 798 aaKnown RBP8.69□□□□□ -1.02
SDCBP-210ENST00000522843 SLC4A8Q2Y0W8 1093 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 SH3TC2Q8TF17 1288 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 ZBED3Q96IU2 234 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms