RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ZNF589Q86UQ0 364 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 FAM160B2Q86V87 743 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 GMCL1Q96IK5 515 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 FBXO40Q9UH90 709 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 FAM184BQ9ULE4 1060 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 LAMA3Q16787 3333 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 LAMA2P24043 3122 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 ATP2A1O14983 1001 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 SDSP20132 328 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 OAZ1P54368 228 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 CNTN2Q02246 1040 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 NUCB1Q02818 461 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 TLE2Q04725 743 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 AAMPQ13685 434 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 ACVR2BQ13705 512 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 TTBK2Q6IQ55 1244 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 CWC27Q6UX04 472 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 MFSD6Q6ZSS7 791 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 SMC5Q8IY18 1101 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 TRERF1Q96PN7 1200 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 RNF146Q9NTX7 359 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 ANAPC4Q9UJX5 808 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 PRR12Q9ULL5 1215 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-235ENST00000522730 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.47
CTNNA1-235ENST00000522730 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 ORC4O43929 436 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 FDX1P10109 184 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 Q7L0L9 218 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 SH3RF1Q7Z6J0 888 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 DEFB123Q8N688 67 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 TMEM47Q9BQJ4 181 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 DDX49Q9Y6V7 483 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 SYNGAP1Q96PV0 1343 aa12.08□□□□□ -0.48
CTNNA1-235ENST00000522730 MYH4Q9Y623 1939 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 PLIN4Q96Q06 1357 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 A0A1W2PQ45 241 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 A0A1W2PQY0 241 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 ZNF213O14771 459 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 C6orf222P0C671 652 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 ACLYP53396 1101 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 KCNA10Q16322 511 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 MUM1L1Q5H9M0 696 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 MAMDC4Q6UXC1 1216 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 NSMFQ6X4W1 530 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 ARMCX2Q7L311 632 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 BADQ92934 168 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 A1CFQ9NQ94 594 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 CCPG1Q9ULG6 757 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 ZNF536O15090 1300 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 A0A0C4DFX4 3053 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 ZNF236Q9UL36 1845 aa12.07□□□□□ -0.48
CTNNA1-235ENST00000522730 GREB1LQ9C091 1923 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 TRIM43BA6NCK2 446 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 AKNAD1Q5T1N1 836 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 TBC1D10CQ8IV04 446 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 TRIM43Q96BQ3 446 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 ABHD16BQ9H3Z7 469 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 SPC25Q9HBM1 224 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 STARD7Q9NQZ5 370 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 TMEM39AQ9NV64 488 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 SYNRGQ9UMZ2 1314 aa12.06□□□□□ -0.48
CTNNA1-235ENST00000522730 MYADML2A6NDP7 307 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 PLA2G6O60733 806 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 ADAMTS4O75173 837 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 DUSP11O75319 330 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 FGRP09769 529 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 TNFAIP2Q03169 654 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 SHHQ15465 462 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms