RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653		Q6ZUG5	572 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	NUCKS1	Q9H1E3	243 aa	Known RBP	11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	FAM184B	Q9ULE4	1060 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653		A0A1W2PRG0	241 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	LGSN	Q5TDP6	509 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	TADA2B	Q86TJ2	420 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	TRIM50	Q86XT4	487 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	CFAP57	Q96MR6	1250 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	PAIP2	Q9BPZ3	127 aa	Known RBP	11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	DENND3	A2RUS2	1198 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	FCER1A	P12319	257 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	LMNB1	P20700	586 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	SCNN1D	P51172	638 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	HAUS6	Q7Z4H7	955 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	TRIM62	Q9BVG3	475 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	GPR108	Q9NPR9	543 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	IFNK	Q9P0W0	207 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	MTRF1L	Q9UGC7	380 aa	Known RBP	11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	PLA2G4D	Q86XP0	818 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	PALM2	Q8IXS6	379 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	LLPH	Q9BRT6	129 aa	Known RBP	11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	CARD6	Q9BX69	1037 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	ATG3	Q9NT62	314 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	ZNRF3	Q9ULT6	936 aa		11.37	□□□□□ -0.59
TCF7-223	ENST00000522653	EXOC3	O60645	756 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	ZNF189	O75820	626 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	TGFB2	P61812	414 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	PRPSAP1	Q14558	356 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	ARRDC4	Q8NCT1	418 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	RIPOR2	Q9Y4F9	1068 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	KDR	P35968	1356 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	CLRN2	A0PK11	232 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	PSD	A5PKW4	1024 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	BMP3	P12645	472 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	YY1	P25490	414 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	BPIFB4	P59827	614 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	AMPD2	Q01433	879 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	TRIM14	Q14142	442 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	DCUN1D2	Q6PH85	259 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	KIF9	Q9HAQ2	790 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	FEM1B	Q9UK73	627 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	ERVK-7	P63135	1459 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	SYNM	O15061	1565 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	DDX39A	O00148	427 aa	Known RBP	11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	RHOXF2B	P0C7M4	288 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	GCFC2	P16383	781 aa	Known RBP	11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	HADH	Q16836	314 aa	Known RBP	11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	RSRC2	Q7L4I2	434 aa	Known RBP	11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	SNX29	Q8TEQ0	813 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	RHOXF2	Q9BQY4	288 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	TNNI1	P19237	187 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	STAT2	P52630	851 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	PPARA	Q07869	468 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	ALCAM	Q13740	583 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	NEDD9	Q14511	834 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	FAM102B	Q5T8I3	360 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	STYK1	Q6J9G0	422 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	TMEM179	Q6ZVK1	233 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	CCDC110	Q8TBZ0	833 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	ARAP3	Q8WWN8	1544 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	SLITRK6	Q9H5Y7	841 aa		11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF7-223	ENST00000522653	RASA3	Q14644	834 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	SDE2	Q6IQ49	451 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	PLEKHM2	Q8IWE5	1019 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	DDX17	Q92841	729 aa	Known RBP	11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	DCTPP1	Q9H773	170 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	CBX8	Q9HC52	389 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	FAN1	Q9Y2M0	1017 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	NCAPD2	Q15021	1401 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	GPAA1	O43292	621 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	ATP8B1	O43520	1251 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	TAF5L	O75529	589 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	VEGFA	P15692	232 aa	Predicted RBP	11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	SLC12A2	P55011	1212 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	LRCH2	Q5VUJ6	765 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	SP8	Q8IXZ3	490 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	NECAB1	Q8N987	351 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	CCDC68	Q9H2F9	335 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	ATP7B	P35670	1465 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L15	C9J2P7	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	C19orf81	C9J6K1	198 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L13	C9JLJ4	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L11	C9JVI0	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L18	D6R9N7	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L22	D6RA61	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L17	D6RBQ6	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L19	D6RCP7	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L20	D6RJB6	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	USP17L24	Q0WX57	530 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	BARGIN	Q6ZT62	677 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	UBL4B	Q8N7F7	174 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	MB21D1	Q8N884	522 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	NLRP7	Q8WX94	980 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	DPF3	Q92784	378 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	PGBD4	Q96DM1	585 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	MMP19	Q99542	508 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	IRAK4	Q9NWZ3	460 aa		11.35	□□□□□ -0.59
TCF7-223	ENST00000522653	TRAF5	O00463	557 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms