RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 DNM1LO00429 736 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 KDM4AO75164 1064 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 SNAI1O95863 264 aaPredicted RBP25.36■■□□□ 1.65
HOXA3-204ENST00000521401 CCDC174Q6PII3 467 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 CHRDL2Q6WN34 429 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 ZNF467Q7Z7K2 595 aaPredicted RBP25.36■■□□□ 1.65
HOXA3-204ENST00000521401 DGKHQ86XP1 1220 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 ANKRD35Q8N283 1001 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 HOMER2Q9NSB8 354 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 RNF146Q9NTX7 359 aa25.36■■□□□ 1.65
HOXA3-204ENST00000521401 LRRC26Q2I0M4 334 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 TKFCQ3LXA3 575 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 SYDE2Q5VT97 1194 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 C7orf61Q8IZ16 206 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 ANKS1AQ92625 1134 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 ACAD9Q9H845 621 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 GPCPD1Q9NPB8 672 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 ZSWIM5Q9P217 1185 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 SYNGAP1Q96PV0 1343 aa25.35■■□□□ 1.65
HOXA3-204ENST00000521401 ZNFX1Q9P2E3 1918 aaKnown RBP25.34■■□□□ 1.65
HOXA3-204ENST00000521401 PTH1RQ03431 593 aa25.34■■□□□ 1.65
HOXA3-204ENST00000521401 ZNF543Q08ER8 600 aa25.34■■□□□ 1.65
HOXA3-204ENST00000521401 GJC2Q5T442 439 aaPredicted RBP25.34■■□□□ 1.65
HOXA3-204ENST00000521401 TRERF1Q96PN7 1200 aa25.34■■□□□ 1.65
HOXA3-204ENST00000521401 SENP6Q9GZR1 1112 aaPredicted RBP25.34■■□□□ 1.65
HOXA3-204ENST00000521401 A1CFQ9NQ94 594 aaKnown RBP25.34■■□□□ 1.65
HOXA3-204ENST00000521401 ALPK3Q96L96 1907 aa25.33■■□□□ 1.65
HOXA3-204ENST00000521401 ALAS1P13196 640 aa25.33■■□□□ 1.65
HOXA3-204ENST00000521401 MUM1L1Q5H9M0 696 aa25.33■■□□□ 1.65
HOXA3-204ENST00000521401 FAM133AQ8N9E0 248 aa25.33■■□□□ 1.65
HOXA3-204ENST00000521401 ARRDC4Q8NCT1 418 aa25.33■■□□□ 1.65
HOXA3-204ENST00000521401 RUFY2Q8WXA3 655 aa25.33■■□□□ 1.65
HOXA3-204ENST00000521401 SGSM2O43147 1006 aa25.32■■□□□ 1.64
HOXA3-204ENST00000521401 ICAM1P05362 532 aa25.32■■□□□ 1.64
HOXA3-204ENST00000521401 CNTN2Q02246 1040 aa25.32■■□□□ 1.64
HOXA3-204ENST00000521401 IQCA1Q86XH1 822 aa25.32■■□□□ 1.64
HOXA3-204ENST00000521401 ZSCAN10Q96SZ4 725 aaPredicted RBP25.32■■□□□ 1.64
HOXA3-204ENST00000521401 RBM27Q9P2N5 1060 aaKnown RBP25.32■■□□□ 1.64
HOXA3-204ENST00000521401 ZMYND8Q9ULU4 1186 aaPredicted RBP25.32■■□□□ 1.64
HOXA3-204ENST00000521401 CNPY2Q9Y2B0 182 aa25.32■■□□□ 1.64
HOXA3-204ENST00000521401 FRMPD3Q5JV73 1810 aa25.32■■□□□ 1.64
HOXA3-204ENST00000521401 LAMA4Q16363 1823 aa25.31■■□□□ 1.64
HOXA3-204ENST00000521401 LRRC41Q15345 812 aa25.31■■□□□ 1.64
HOXA3-204ENST00000521401 CCDC178Q5BJE1 867 aa25.31■■□□□ 1.64
HOXA3-204ENST00000521401 ENAHQ8N8S7 591 aaPredicted RBP25.31■■□□□ 1.64
HOXA3-204ENST00000521401 KRT23Q9C075 422 aa25.31■■□□□ 1.64
HOXA3-204ENST00000521401 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.31■■□□□ 1.64
HOXA3-204ENST00000521401 CCPG1Q9ULG6 757 aa25.31■■□□□ 1.64
HOXA3-204ENST00000521401 SOWAHBA6NEL2 793 aa25.3■■□□□ 1.64
HOXA3-204ENST00000521401 POTEB2H3BUK9 544 aa25.3■■□□□ 1.64
HOXA3-204ENST00000521401 AKR1A1P14550 325 aa25.3■■□□□ 1.64
HOXA3-204ENST00000521401 CYP21A2P08686 494 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 RARBP10826 455 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 ARMCX2Q7L311 632 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 PNMA1Q8ND90 353 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 LENG1Q96BZ8 264 aaPredicted RBP25.29■■□□□ 1.64
HOXA3-204ENST00000521401 KATNBL1Q9H079 304 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 CNNM2Q9H8M5 875 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 XPNPEP3Q9NQH7 507 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 ASTN1O14525 1302 aa25.29■■□□□ 1.64
HOXA3-204ENST00000521401 GOLGA8HP0CJ92 632 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 SYN1P17600 705 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 ATN1P54259 1190 aaPredicted RBP25.28■■□□□ 1.64
HOXA3-204ENST00000521401 ACVR2BQ13705 512 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 CYB5R4Q7L1T6 521 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 SKAP1Q86WV1 359 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 CCDC144CPQ8IYA2 1237 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 CYP39A1Q9NYL5 469 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 ZHX1Q9UKY1 873 aaPredicted RBP25.28■■□□□ 1.64
HOXA3-204ENST00000521401 TAF6LQ9Y6J9 622 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 TNKSO95271 1327 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 CEP290O15078 2479 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 PLXNA1Q9UIW2 1896 aa25.28■■□□□ 1.64
HOXA3-204ENST00000521401 KBTBD13C9JR72 458 aa25.27■■□□□ 1.64
HOXA3-204ENST00000521401 PGK1P00558 417 aa25.27■■□□□ 1.64
HOXA3-204ENST00000521401 FXR1P51114 621 aaKnown RBP eCLIP25.27■■□□□ 1.64
HOXA3-204ENST00000521401 GPATCH4Q5T3I0 446 aaKnown RBP25.27■■□□□ 1.64
HOXA3-204ENST00000521401 GDF15Q99988 308 aa25.27■■□□□ 1.64
HOXA3-204ENST00000521401 CPVLQ9H3G5 476 aa25.27■■□□□ 1.64
HOXA3-204ENST00000521401 KAT14Q9H8E8 782 aa25.27■■□□□ 1.64
HOXA3-204ENST00000521401 PCDH10Q9P2E7 1040 aa25.27■■□□□ 1.64
HOXA3-204ENST00000521401 FAM184BQ9ULE4 1060 aa25.27■■□□□ 1.64
HOXA3-204ENST00000521401 U3KPZ7 1027 aaPredicted RBP25.27■■□□□ 1.64
HOXA3-204ENST00000521401 ADCY6O43306 1168 aa25.26■■□□□ 1.63
HOXA3-204ENST00000521401 ADAMTS4O75173 837 aa25.26■■□□□ 1.63
HOXA3-204ENST00000521401 MYCNP04198 464 aaPredicted RBP25.26■■□□□ 1.63
HOXA3-204ENST00000521401 SEC23AQ15436 765 aa25.26■■□□□ 1.63
HOXA3-204ENST00000521401 CENPQQ7L2Z9 268 aaPredicted RBP25.26■■□□□ 1.63
HOXA3-204ENST00000521401 CLEC4DQ8WXI8 215 aa25.26■■□□□ 1.63
HOXA3-204ENST00000521401 PURBQ96QR8 312 aaKnown RBP25.26■■□□□ 1.63
HOXA3-204ENST00000521401 UBA5Q9GZZ9 404 aa25.26■■□□□ 1.63
HOXA3-204ENST00000521401 ABHD16BQ9H3Z7 469 aa25.26■■□□□ 1.63
HOXA3-204ENST00000521401 RANBP2P49792 3224 aaKnown RBP25.25■■□□□ 1.63
HOXA3-204ENST00000521401 NFIBO00712 420 aa25.25■■□□□ 1.63
HOXA3-204ENST00000521401 ADCYAP1R1P41586 468 aa25.25■■□□□ 1.63
HOXA3-204ENST00000521401 SLC39A5Q6ZMH5 540 aa25.25■■□□□ 1.63
HOXA3-204ENST00000521401 MAP4K1Q92918 833 aa25.25■■□□□ 1.63
HOXA3-204ENST00000521401 PHF24Q9UPV7 400 aa25.25■■□□□ 1.63
HOXA3-204ENST00000521401 DDX49Q9Y6V7 483 aaKnown RBP25.25■■□□□ 1.63
HOXA3-204ENST00000521401 WDR19Q8NEZ3 1342 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms