RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 RAB6AP20340 208 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 ADMP35318 185 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 GP2P55259 537 aaKnown RBP4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 ANAPC15P60006 121 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 SUMO1P63165 101 aaKnown RBP4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 RNF4P78317 190 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 MAP4K2Q12851 820 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 CDK5R2Q13319 367 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 GRB10Q13322 594 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 TESK1Q15569 626 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 BEND4Q6ZU67 534 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 TMC3Q7Z5M5 1100 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 ADCY4Q8NFM4 1077 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 COPS5Q92905 334 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 CAAP1Q9H8G2 361 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 SLC52A2Q9HAB3 445 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 LGR6Q9HBX8 967 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 CYP26B1Q9NR63 512 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 MAPRE3Q9UPY8 281 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 DIS3Q9Y2L1 958 aaKnown RBP4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 THRAP3Q9Y2W1 955 aaKnown RBP4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 U3KQE9 123 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 SHISA3A0PJX4 238 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 PRR33A8MZF0 331 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 AGRPO00253 132 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 PDE8AO60658 829 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 MAP4P27816 1152 aaKnown RBP4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 ETV3P41162 512 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 EVA1CP58658 441 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 INTS5Q6P9B9 1019 aaKnown RBP4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 LRRTM3Q86VH5 581 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 DTX1Q86Y01 620 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 UBR7Q8N806 425 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 DTWD2Q8NBA8 298 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 TMEM145Q8NBT3 493 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 SHKBP1Q8TBC3 707 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 MKRN2Q9H000 416 aaKnown RBP4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 GBP3Q9H0R5 595 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 METTL14Q9HCE5 456 aaKnown RBP4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 SSU72Q9NP77 194 aaKnown RBP4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 NPFFR2Q9Y5X5 522 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 PHLDB1Q86UU1 1377 aa4.9□□□□□ -1.63
HMGN1P28-201ENST00000521340 BLACEA4D250 179 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 SART1O43290 800 aaKnown RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 SIGLEC6O43699 453 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 MARCH6O60337 910 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 VAMP4O75379 141 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 KCNH1O95259 989 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 ZNF865P0CJ78 1059 aaPredicted RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 ITGA4P13612 1032 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 TAL1P17542 331 aaPredicted RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 HOXA10P31260 410 aaPredicted RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 HOXC12P31275 282 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 CEBPAP49715 358 aaPredicted RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 IRAK1P51617 712 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 USP11P51784 963 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 MAP7Q14244 749 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 PCBP1Q15365 356 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 PRSS53Q2L4Q9 553 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 BRAPQ7Z569 592 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 ADAT2Q7Z6V5 191 aaKnown RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 FIBCD1Q8N539 461 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 TOP6BLQ8N6T0 577 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 NPLOC4Q8TAT6 608 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 CHAC2Q8WUX2 184 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 CCDC140Q96MF4 163 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 FMNL2Q96PY5 1086 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 CDC6Q99741 560 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 ORAI3Q9BRQ5 295 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 DUSP15Q9H1R2 295 aaPredicted RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 KCNF1Q9H3M0 494 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 GFOD1Q9NXC2 390 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 MAGEC2Q9UBF1 373 aaPredicted RBP4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 PCDHB12Q9Y5F1 795 aa4.89□□□□□ -1.63
HMGN1P28-201ENST00000521340 FAM95CA0A1B0GW59 222 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 TCRBV16S1A1N1A0A5B0 115 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 WDR64B1ANS9 1081 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 H0Y8X5 98 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 IGF2BP3O00425 579 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 PRAMEF1O95521 474 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 GABREP78334 506 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 TNK2Q07912 1038 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 ZNF460Q14592 562 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 SEPT7Q16181 437 aaKnown RBP4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 BRDTQ58F21 947 aaPredicted RBP4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 STYK1Q6J9G0 422 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 ABHD17CQ6PCB6 329 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 POMZP3Q6PJE2 187 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 OGFOD3Q6PK18 319 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 LHFPL2Q6ZUX7 228 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 FRS2Q8WU20 508 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 PTPRN2Q92932 1015 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 HDAC8Q9BY41 377 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 NOL6Q9H6R4 1146 aaKnown RBP4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 LRP2BPQ9P2M1 347 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 TMEFF2Q9UIK5 374 aaPredicted RBP4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 CAPN6Q9Y6Q1 641 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 WASHC2CQ9Y4E1 1318 aa4.88□□□□□ -1.63
HMGN1P28-201ENST00000521340 NOP56O00567 594 aaKnown RBP4.87□□□□□ -1.63
HMGN1P28-201ENST00000521340 PAX4O43316 350 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms