RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 A6NHS1 94 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 CPLX1O14810 134 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 FMNL1O95466 1100 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 LINGO3P0C6S8 592 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 EPB41P11171 864 aaKnown RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 IGHMBP2P38935 993 aaKnown RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 BCAMP50895 628 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 USP14P54578 494 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 USP4Q13107 963 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 XRCC4Q13426 336 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 RINLQ6ZS11 566 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 ARHGAP22Q7Z5H3 698 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 SDCCAG8Q86SQ7 713 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 NUP133Q8WUM0 1156 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 ZNF396Q96N95 335 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 G3BP2Q9UN86 482 aaKnown RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 LTBP4Q8N2S1 1624 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 GOLGA6BA6NDN3 693 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 RNF8O76064 485 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 TFRCP02786 760 aaKnown RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 CRELD2Q6UXH1 353 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-209ENST00000519674 NUP58Q9BVL2 599 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 YIPF3Q9GZM5 350 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 EPN3Q9H201 632 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 GJB4Q9NTQ9 266 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 C15orf41Q9Y2V0 281 aa9.44□□□□□ -0.9
TRPS1-209ENST00000519674 TARSL2A2RTX5 802 aaKnown RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 CTAGE9A4FU28 777 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 B4E1Z4 1266 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 MBD4O95243 580 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 CCDC175P0C221 793 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 RXRAP19793 462 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 RANBP1P43487 201 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 MAP3K12Q12852 859 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 MKRN4PQ13434 485 aaPredicted RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 ILDR1Q86SU0 546 aaPredicted RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 TAX1BP1Q86VP1 789 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 CCDC148Q8NFR7 591 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 CCDC114Q96M63 670 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 STRBPQ96SI9 672 aaKnown RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 INCENPQ9NQS7 918 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 IQSEC3Q9UPP2 1182 aaPredicted RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 PDLIM1O00151 329 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 KIF5CO60282 957 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 OPA1O60313 960 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 NLRP12P59046 1061 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 CHRNDQ07001 517 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 CCDC178Q5BJE1 867 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 RNF187Q5TA31 235 aaPredicted RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 BARGINQ6ZT62 677 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 SMIM5Q71RC9 77 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 CYB5R4Q7L1T6 521 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 GALNT15Q8N3T1 639 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 ZNF473Q8WTR7 871 aaKnown RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 DESI2Q9BSY9 194 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 SELENOOQ9BVL4 669 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 ARMT1Q9H993 441 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 ANGEL1Q9UNK9 670 aaKnown RBP9.43□□□□□ -0.9
TRPS1-209ENST00000519674 COL4A1P02462 1669 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 TAF1P21675 1872 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 RREB1Q92766 1687 aa9.43□□□□□ -0.9
TRPS1-209ENST00000519674 SRRM3A6NNA2 597 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 B4DLN1 442 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 TMEM232C9JQI7 657 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 MYO1BO43795 1136 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 MYL1P05976 194 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 BLMHQ13867 455 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 EMC10Q5UCC4 262 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 CCDC170Q8IYT3 715 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 RBM17Q96I25 401 aaKnown RBP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 RBM41Q96IZ5 413 aaKnown RBP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 EPB41L4AQ9HCS5 686 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 INTS13Q9NVM9 706 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 HAUS2Q9NVX0 235 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 ZNF652Q9Y2D9 606 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 OATP04181 439 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 SSBP05455 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 TPP2P29144 1249 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 AMPD2Q01433 879 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 PDCLQ13371 301 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 CFAP100Q494V2 611 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 BICDL1Q6ZP65 573 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 NAPBQ9H115 298 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 FANCLQ9NW38 375 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 HOOK1Q9UJC3 728 aaKnown RBP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 DOCK2Q92608 1830 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 DNM1LO00429 736 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 ATP6V1G2O95670 118 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 POLR3DP05423 398 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-209ENST00000519674 LSP1P33241 339 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 ME1P48163 572 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 MYO1EQ12965 1108 aa9.42□□□□□ -0.9
TRPS1-209ENST00000519674 IFT88Q13099 833 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms